RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 COPZ1P61923 177 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 RHOGP84095 191 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 TAF9Q16594 264 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 GLYATL3Q5SZD4 288 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM244Q5VVB8 128 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 HAGHLQ6PII5 290 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 SDIM1Q6ZPB5 146 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 Q6ZQT7 251 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 MSRB3Q8IXL7 192 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 MMGT1Q8N4V1 131 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 WFDC5Q8TCV5 224 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM106AQ96A25 262 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 SCGB3A1Q96QR1 104 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 HIST1H2BLQ99880 126 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 PDCD10Q9BUL8 212 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 MRPL32Q9BYC8 188 aaKnown RBP2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 SMDT1Q9H4I9 107 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 CBLN4Q9NTU7 201 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 BAIAP2Q9UQB8 552 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 RNF11Q9Y3C5 154 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 A2MP01023 1474 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 RPRD2Q5VT52 1461 aaKnown RBP2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 MYH10P35580 1976 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 ATG2BQ96BY7 2078 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 TICRRQ7Z2Z1 1910 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 RALGAPA2Q2PPJ7 1873 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGKV1OR2-108A0A075B7D4 117 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 TRGV10A0A0A0MS01 117 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 TRBV7-6A0A0J9YX20 115 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 CREBL2O60519 120 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 CXCL1P09341 107 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 METTL15P1P0C7V9 234 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 EIF2B2P49770 351 aaKnown RBP2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 HBBP68871 147 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF141Q15928 474 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 MIAQ16674 131 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 LGALSLQ3ZCW2 172 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM69Q5SWH9 247 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 LDLRAD2Q5SZI1 272 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 Q5XG85 94 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 C22orf39Q6P5X5 142 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 DEFB128Q7Z7B8 93 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 CTAGE3PQ8IX95 158 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 PDZD9Q8IXQ8 264 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 RPRMLQ8N4K4 120 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR4S1Q8NGB4 309 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 CLDND2Q8NHS1 167 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZC2HC1AQ96GY0 325 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 MRPL16Q9NX20 251 aaKnown RBP2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 TNFSF18Q9UNG2 199 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 HS3ST2Q9Y278 367 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 DISP2A7MBM2 1401 aa2.42□□□□□ -2.02
HMGB1P38-201ENST00000490557 OTOFQ9HC10 1997 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 BAZ1BQ9UIG0 1483 aaKnown RBP2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 TRAV13-1A0A0B4J241 112 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGKV1-9A0A0C4DH69 117 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 C9orf170A2RU37 121 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 C19orf71A6NCJ1 209 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 F6UZH7 168 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 H3BMG7 143 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 H3BQ85 93 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 PGLYRP1O75594 196 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV3-53P01767 116 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 GPX1P07203 203 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 RPL35P42766 123 aaKnown RBP2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 RAB5CP51148 216 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 ARPP19P56211 112 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 MYL5Q02045 173 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 AMMECR1LQ6DCA0 310 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 EIF5AL1Q6IS14 154 aaKnown RBP2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 NOXRED1Q6NXP6 359 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 TEX29Q8N6K0 151 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 SMCR5Q8TEV8 140 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF714Q96N38 554 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 NPCDR1Q9BY65 106 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 HEY1Q9Y5J3 304 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 CACNA1SQ13698 1873 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 TRAPPC8Q9Y2L5 1435 aa2.41□□□□□ -2.02
HMGB1P38-201ENST00000490557 VIRMAQ69YN4 1812 aaKnown RBP2.4□□□□□ -2.02
HMGB1P38-201ENST00000490557 KIF13BQ9NQT8 1826 aa2.4□□□□□ -2.02
HMGB1P38-201ENST00000490557 MRC2Q9UBG0 1479 aa2.4□□□□□ -2.02
HMGB1P38-201ENST00000490557 NLRC5Q86WI3 1866 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 A0A0J9YW62 118 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 SLC22A1O15245 554 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 NDUFB3O43676 98 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 HIST1H2BKO60814 126 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 SOD1P00441 154 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 IGKV1-16P04430 117 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 HIST1H2BJP06899 126 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 IGLC6P0CF74 106 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 RPL22P35268 128 aaKnown RBP2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 RBP2P50120 134 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 HES1Q14469 280 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 OCIAD2Q56VL3 154 aa2.4□□□□□ -2.03
HMGB1P38-201ENST00000490557 TMEM14EPQ6UXP3 125 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms