RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CLRN3Q8NCR9 226 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 RNF141Q8WVD5 230 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 PINX1Q96BK5 328 aaKnown RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 SAT2Q96F10 170 aaPredicted RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 BSCL2Q96G97 398 aaPredicted RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 SPAG8Q99932 426 aaPredicted RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 FAM110AQ9BQ89 295 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 CHRDL1Q9BU40 450 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 HEYLQ9NQ87 328 aaPredicted RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 DAZ1Q9NQZ3 744 aaKnown RBP7.77□□□□□ -1.17
TTC28-207ENST00000490475 C21orf62Q9NYP8 219 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
TTC28-207ENST00000490475 A0A1B0GU03 582 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
TTC28-207ENST00000490475 UBE2CO00762 179 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 TSPAN4O14817 238 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 SIX6O95475 246 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 MT-CO2P00403 227 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 CTSGP08311 255 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 SUB1P53999 127 aaKnown RBP eCLIP7.76□□□□□ -1.17
TTC28-207ENST00000490475 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
TTC28-207ENST00000490475 BTN1A1Q13410 526 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 Q56UQ5 140 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 RBKSQ9H477 322 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 MLXQ9UH92 298 aa7.76□□□□□ -1.17
TTC28-207ENST00000490475 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
TTC28-207ENST00000490475 NDUFA4O00483 81 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 TGOLN2O43493 480 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 PITX3O75364 302 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 ADAP1O75689 374 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 SCO1O75880 301 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
TTC28-207ENST00000490475 ADMP35318 185 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 MFAP4P55083 255 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 BSXQ3C1V8 233 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 PVRIGQ6DKI7 326 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 BTNL8Q6UX41 500 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 UNQ9165/PRO28630Q6UXU0 137 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 Q6ZWC4 215 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 BAP18Q8IXM2 172 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 TMEM217Q8N7C4 229 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 TMEM170AQ8WVE7 144 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 TMEM190Q8WZ59 177 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 ZNF471Q9BX82 626 aaPredicted RBP7.75□□□□□ -1.17
TTC28-207ENST00000490475 MBD2Q9UBB5 411 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 HSPB7Q9UBY9 170 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 SELENOKQ9Y6D0 94 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 CSMD3Q7Z407 3707 aa7.75□□□□□ -1.17
TTC28-207ENST00000490475 IGHV3OR16-8A0A075B7F1 116 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 TMEM218A2RU14 115 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 OR4C46A6NHA9 309 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 K7EMT4 169 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 CD5P06127 495 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 BMI1P35226 326 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 RELQ04864 619 aaPredicted RBP7.74□□□□□ -1.17
TTC28-207ENST00000490475 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 PRSS54Q6PEW0 395 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 LINC00469Q8N7U9 141 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 KIR2DL5BQ8NHK3 375 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 DTD1Q8TEA8 209 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 CACNG8Q8WXS5 425 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 SEC11CQ9BY50 192 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
TTC28-207ENST00000490475 MAGT1Q9H0U3 335 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
TTC28-207ENST00000490475 RETNQ9HD89 108 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 MRPL36Q9P0J6 103 aaKnown RBP7.74□□□□□ -1.17
TTC28-207ENST00000490475 TMED3Q9Y3Q3 217 aa7.74□□□□□ -1.17
TTC28-207ENST00000490475 PIGBOS1A0A0B4J2F0 54 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 C15orf62A8K5M9 175 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
TTC28-207ENST00000490475 SNAPINO95295 136 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 IFNA10P01566 189 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 APOC3P02656 99 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 SLC25A6P12236 298 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 C2orf83Q53S99 150 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 ZNF414Q96IQ9 312 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 TXN2Q99757 166 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 WFDC10AQ9H1F0 79 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
TTC28-207ENST00000490475 NUPL2O15504 423 aaKnown RBP7.72□□□□□ -1.17
TTC28-207ENST00000490475 ZNF207O43670 478 aaKnown RBP7.72□□□□□ -1.17
TTC28-207ENST00000490475 GNG7O60262 68 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 YIF1AO95070 293 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 TMEM50AO95807 157 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 IAPPP10997 89 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 FCGR2BP31994 310 aaPredicted RBP7.72□□□□□ -1.17
TTC28-207ENST00000490475 OPRK1P41145 380 aa7.72□□□□□ -1.17
TTC28-207ENST00000490475 NPBWR1P48145 328 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms