RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 NUP62P37198 522 aaPredicted RBP11.26□□□□□ -0.61
NUP58-213ENST00000490231 OR51G1Q8NGK1 321 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 NEU1Q99519 415 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 KCNIP3Q9Y2W7 256 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
NUP58-213ENST00000490231 CTDSP2O14595 271 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 IFNA10P01566 189 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 P0DMU3 169 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 CCR6P51684 374 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
NUP58-213ENST00000490231 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 OR51S1Q8NGJ8 323 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 DTD1Q8TEA8 209 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 RABL2AQ9UBK7 228 aaPredicted RBP11.25□□□□□ -0.61
NUP58-213ENST00000490231 HSPB7Q9UBY9 170 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 PFDN2Q9UHV9 154 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 RABL2BQ9UNT1 228 aa11.25□□□□□ -0.61
NUP58-213ENST00000490231 A0A0B4J2A0 478 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 ZNF705FA8MVS1 300 aaPredicted RBP11.24□□□□□ -0.61
NUP58-213ENST00000490231 ZNF705DP0CH99 300 aaPredicted RBP11.24□□□□□ -0.61
NUP58-213ENST00000490231 ZNF705BP0CI00 300 aaPredicted RBP11.24□□□□□ -0.61
NUP58-213ENST00000490231 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
NUP58-213ENST00000490231 KLF9Q13886 244 aaPredicted RBP11.24□□□□□ -0.61
NUP58-213ENST00000490231 LGI3Q8N145 548 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 NDUFAF3Q9BU61 184 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 SHPKQ9UHJ6 478 aa11.24□□□□□ -0.61
NUP58-213ENST00000490231 AGRNO00468 2067 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 GPX4P36969 197 aaPredicted RBP11.23□□□□□ -0.61
NUP58-213ENST00000490231 IL18Q14116 193 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 SMCO1Q147U7 214 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 CLVS1Q8IUQ0 354 aaPredicted RBP11.23□□□□□ -0.61
NUP58-213ENST00000490231 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 SCGB3A2Q96PL1 93 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
NUP58-213ENST00000490231 SPART-AS1P0CW21 52 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 SPCS2Q15005 226 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 FOXI2Q6ZQN5 318 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 PBDC1Q9BVG4 233 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 RBKSQ9H477 322 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 SAV1Q9H4B6 383 aaPredicted RBP11.22□□□□□ -0.61
NUP58-213ENST00000490231 PRR13Q9NZ81 148 aa11.22□□□□□ -0.61
NUP58-213ENST00000490231 IGKV1D-37A0A075B6S9 117 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 ZFP92A6NM28 416 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 SOCS3O14543 225 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 FABP1P07148 127 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 ID1P41134 155 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 PSMB3P49720 205 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 SUPT4H1P63272 117 aaKnown RBP11.21□□□□□ -0.61
NUP58-213ENST00000490231 GAMTQ14353 236 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 SPATA31B1PQ5VZV4 182 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.61
NUP58-213ENST00000490231 WDR12Q9GZL7 423 aaKnown RBP11.21□□□□□ -0.61
NUP58-213ENST00000490231 DNAH2Q9P225 4427 aa11.21□□□□□ -0.62
NUP58-213ENST00000490231 FAT2Q9NYQ8 4349 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 TEX48A0A1B0GUV7 120 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 ANXA3P12429 323 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 ALDH3B2P48448 385 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 SRPXP78539 464 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 ZNF90Q03938 601 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 ZNF709Q8N972 641 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 SLC35E1Q96K37 410 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 LINC00052Q96N35 136 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 MRPS26Q9BYN8 205 aaKnown RBP11.2□□□□□ -0.62
NUP58-213ENST00000490231 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
NUP58-213ENST00000490231 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 SNRPGP15A8MWD9 76 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 AKR1C4P17516 323 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 DEFB1P60022 68 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 ZNF79Q15937 498 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 SAMD13Q5VXD3 122 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 COQ8AQ8NI60 647 aa11.19□□□□□ -0.62
NUP58-213ENST00000490231 CCDC59Q9P031 241 aaKnown RBP11.19□□□□□ -0.62
NUP58-213ENST00000490231 RSL24D1Q9UHA3 163 aaKnown RBP11.19□□□□□ -0.62
NUP58-213ENST00000490231 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 ISLRO14498 428 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 EMP1P54849 157 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 PAX9P55771 341 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 FXYD7P58549 80 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 LYZP61626 148 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
NUP58-213ENST00000490231 OR1S1Q8NH92 325 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms