RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DOK4Q8TEW6 326 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RTN4IP1Q8WWV3 396 aaPredicted RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GHSRQ92847 366 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BHQ93079 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PTH2Q96A98 100 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 DDIT4LQ96D03 193 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SEH1LQ96EE3 360 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ADTRPQ96IZ2 230 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM56Q96MV1 263 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BNQ99877 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BMQ99879 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GABRG3Q99928 467 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GINS3Q9BRX5 216 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SNRNP25Q9BV90 132 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 LINC00470Q9BZP3 86 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 WDR61Q9GZS3 305 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR2D2Q9H210 308 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ELOVL3Q9HB03 270 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF286AQ9HBT8 521 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 NPVFQ9HCQ7 196 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ENY2Q9NPA8 101 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MANBALQ9NQG1 85 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 GPR84Q9NQS5 396 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 RBM22Q9NW64 420 aaKnown RBP eCLIP1.49□□□□□ -2.175e-6■■■□□ 14.8
HMGN1-218ENST00000490032 GNG13Q9P2W3 67 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 DHCR7Q9UBM7 475 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 CLN8Q9UBY8 286 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 OR5V1Q9UGF6 321 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 SMPXQ9UHP9 88 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ANXA10Q9UJ72 324 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MCTS1Q9ULC4 181 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MMP17Q9ULZ9 603 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PIGLQ9Y2B2 252 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 YARS2Q9Y2Z4 477 aaKnown RBP1.49□□□□□ -2.17
HMGN1-218ENST00000490032 MED31Q9Y3C7 131 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 UFC1Q9Y3C8 167 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM56-RWDD3S4R434 201 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 ARL2-SNX15V9GYD0 113 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PKD1L2Q7Z442 2459 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 PHIPQ8WWQ0 1821 aa1.49□□□□□ -2.17
HMGN1-218ENST00000490032 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 TRBV6-7A0A0A0MS04 114 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 IGHV3-74A0A0B4J1X5 117 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 IGKV1D-13A0A0B4J2D9 117 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 FAM24AA6NFZ4 105 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 LINC01549A6NIU2 74 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 FOXE1O00358 373 aaPredicted RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CDC42EP2O14613 210 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ALOX12BO75342 701 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF737O75373 536 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CLDN11O75508 207 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CTAG2O75638 210 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 OR7C1O76099 320 aaPredicted RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 SLC25A14O95258 325 aaPredicted RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CNIH1O95406 144 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CD160O95971 181 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 HLA-DQA1P01909 254 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 HLA-DRB1P01911 266 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 IGKV5-2P06315 115 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ACYP1P07311 99 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 SPINK8P0C7L1 97 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 P0C880 135 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 LIMS3P0CW19 117 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 LIMS4P0CW20 117 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 IGKV1-13P0DP09 117 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 IFITM1P13164 125 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 S100A7P31151 101 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ASIPP42127 132 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 UQCRFS1P47985 274 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 RND2P52198 227 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 DLX6P56179 175 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM33P57088 247 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 TAS2R45P59539 299 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 GRB2P62993 217 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 RPL38P63173 70 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 RPS21P63220 83 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 HIST1H1AQ02539 215 aaPredicted RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 SLC25A11Q02978 314 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF90Q03938 601 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 DHRS2Q13268 280 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CDK5R1Q15078 307 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 MMDQ15546 238 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 GABRA6Q16445 453 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 MRPL23Q16540 153 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 RPEL1Q2QD12 228 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 LRRC75BQ2VPJ9 315 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 SLC25A35Q3KQZ1 300 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 Q499Y3 187 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 TPTE2P1Q5T6R2 138 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 AADACL3Q5VUY0 350 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 AMMECR1LQ6DCA0 310 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 RNASEKQ6P5S7 137 aaKnown RBP1.48□□□□□ -2.17
HMGN1-218ENST00000490032 SCIMPQ6UWF3 145 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ALKAL1Q6UXT8 129 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 TMEM136Q6ZRR5 245 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CLEC20AQ6ZU45 233 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 ZNF550Q7Z398 422 aa1.48□□□□□ -2.17
HMGN1-218ENST00000490032 CMC1Q7Z7K0 106 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms