RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 IGHV7-81A0A0B4J1V7 117 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 CGB1A6NKQ9 187 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 MT-CO2P00403 227 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 CRYGCP07315 174 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 MYOD1P15172 320 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 HOXA5P20719 270 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 KRTAP1-1Q07627 177 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 TMEM219Q86XT9 240 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 TTC9CQ8N5M4 171 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 OR5B12Q96R08 314 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 NPFFR1Q9GZQ6 430 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 SLC25A22Q9H936 323 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 NPVFQ9HCQ7 196 aa9.23□□□□□ -0.93
TRIM40-208ENST00000489892 A0A1W2PPV4 95 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 CRLF1O75462 422 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 IGHV4-59P01825 116 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 AREGP15514 252 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 S100A2P29034 98 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 CDX1P47902 265 aaPredicted RBP9.22□□□□□ -0.93
TRIM40-208ENST00000489892 CRIP2P52943 208 aaPredicted RBP9.22□□□□□ -0.93
TRIM40-208ENST00000489892 FGF8P55075 233 aaPredicted RBP9.22□□□□□ -0.93
TRIM40-208ENST00000489892 RPL15P61313 204 aaKnown RBP9.22□□□□□ -0.93
TRIM40-208ENST00000489892 CD69Q07108 199 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 LY6EQ16553 131 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 SSX7Q7RTT5 188 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 BCL6BQ8N143 479 aaPredicted RBP9.22□□□□□ -0.93
TRIM40-208ENST00000489892 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 FAM210BQ96KR6 192 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 JMJD8Q96S16 334 aa9.22□□□□□ -0.93
TRIM40-208ENST00000489892 PRSS46E5RG02 174 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 E7EUB6 86 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 H3BUA1 57 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 H7BYZ3 331 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 PLXNB1O43157 2135 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 CXorf1O96002 111 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 IGHG2P01859 326 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 IGF1P05019 195 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 FABP1P07148 127 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 SRD5A1P18405 259 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 SSBP2P81877 361 aaPredicted RBP9.21□□□□□ -0.94
TRIM40-208ENST00000489892 KCNIP4Q6PIL6 250 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 TEPPQ6URK8 271 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 UNQ5815/PRO19632Q6UWF5 114 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 SLC16A13Q7RTY0 426 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM144Q7Z5S9 345 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 FAM110DQ8TAY7 271 aaPredicted RBP9.21□□□□□ -0.94
TRIM40-208ENST00000489892 ZNF418Q8TF45 676 aaPredicted RBP9.21□□□□□ -0.94
TRIM40-208ENST00000489892 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 PRSS22Q9GZN4 317 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 PARLQ9H300 379 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.94
TRIM40-208ENST00000489892 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
TRIM40-208ENST00000489892 MDFIC2A0A1B0GVS7 189 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 CXCL1P09341 107 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 FAM3BP58499 235 aaPredicted RBP9.2□□□□□ -0.94
TRIM40-208ENST00000489892 CTAG1AP78358 180 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 ADIRFQ15847 76 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 C9orf152Q5JTZ5 239 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 SIGLECL1Q8N7X8 197 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 TMEM170AQ8WVE7 144 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 MISP3Q96FF7 219 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 C19orf24Q9BVV8 132 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 DOK5Q9P104 306 aa9.2□□□□□ -0.94
TRIM40-208ENST00000489892 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 C11orf94C9JXX5 98 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
TRIM40-208ENST00000489892 BRI3O95415 125 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 TYMSP04818 313 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 REG1AP05451 166 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 STAG3L2P0CL84 134 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 STAG3L3P0CL85 134 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 B2MP61769 119 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 SELENOTP62341 195 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 RHOBP62745 196 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 RPL23P62829 140 aaKnown RBP9.19□□□□□ -0.94
TRIM40-208ENST00000489892 NDPQ00604 133 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 ECSCRQ19T08 205 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 FBLN7Q53RD9 439 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 ARSJQ5FYB0 599 aaPredicted RBP9.19□□□□□ -0.94
TRIM40-208ENST00000489892 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 TREML4Q6UXN2 200 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 OR4F5Q8NH21 305 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 OR4F4Q96R69 305 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 HSPB9Q9BQS6 159 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 GGTLC1Q9BX51 225 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 OR51M1Q9H341 326 aa9.19□□□□□ -0.94
TRIM40-208ENST00000489892 TRAV30A0A087WSZ9 112 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 FAM223BA6NKX1 122 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 CLN5O75503 358 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 AMY1AP04745 511 aa9.18□□□□□ -0.94
TRIM40-208ENST00000489892 RPL29P47914 159 aaKnown RBP9.18□□□□□ -0.94
TRIM40-208ENST00000489892 KLK9Q2XQG4 91 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms