RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
VPS26A-205ENST00000489656 OR1L4Q8NGR5 311 aa10.98□□□□□ -0.65
VPS26A-205ENST00000489656 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
VPS26A-205ENST00000489656 PFDN5Q99471 154 aa10.98□□□□□ -0.65
VPS26A-205ENST00000489656 RNF2Q99496 336 aa10.98□□□□□ -0.65
VPS26A-205ENST00000489656 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 OR2T8A6NH00 312 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 NUDT19A8MXV4 375 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 NUPL2O15504 423 aaKnown RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 TGOLN2O43493 480 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 HBE1P02100 147 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 OR5G3P0C626 314 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 RD3LP0DJH9 198 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 PSG1P11464 419 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 ADMP35318 185 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 CDC34P49427 236 aaPredicted RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 RHOBP62745 196 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 KIAA0141Q14154 515 aaPredicted RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 OXLD1Q5BKU9 147 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 GCSAMLQ5JQS6 135 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 ZNF343Q6P1L6 599 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 OR51G1Q8NGK1 321 aa10.97□□□□□ -0.65
VPS26A-205ENST00000489656 WIPF2Q8TF74 440 aaPredicted RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
VPS26A-205ENST00000489656 ELOA3CA0A087WX78 387 aaPredicted RBP10.96□□□□□ -0.65
VPS26A-205ENST00000489656 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 OR2C1O95371 312 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 IGHV3-23P01764 117 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 GPR183P32249 361 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 FAM122CQ6P4D5 195 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 C10orf99Q6UWK7 81 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 ZNF600Q6ZNG1 722 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 SSX7Q7RTT5 188 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 TMEM37Q8WXS4 190 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 ZNF414Q96IQ9 312 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 PFDN2Q9UHV9 154 aa10.96□□□□□ -0.65
VPS26A-205ENST00000489656 A0A1W2PPV4 95 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 MAP1LC3B2A6NCE7 125 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 CLEC3BP05452 202 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 IL34Q6ZMJ4 242 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 KLHDC1Q8N7A1 406 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 Q8WTZ3 238 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 SFT2D1Q8WV19 159 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 MAP1LC3BQ9GZQ8 125 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 HRH4Q9H3N8 390 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
VPS26A-205ENST00000489656 COX7A2P2O60397 106 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 HYPMO75409 117 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 RPLP1P05386 114 aaKnown RBP10.94□□□□□ -0.66
VPS26A-205ENST00000489656 STAG3L2P0CL84 134 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 STAG3L3P0CL85 134 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 PMS2P11Q13670 270 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 FAM78BQ5VT40 261 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 LINC01006Q8NI28 216 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
VPS26A-205ENST00000489656 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
VPS26A-205ENST00000489656 RAB19A4D1S5 217 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 ARL3P36405 182 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 LYZP61626 148 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 RELQ04864 619 aaPredicted RBP10.93□□□□□ -0.66
VPS26A-205ENST00000489656 LCN15Q6UWW0 184 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
VPS26A-205ENST00000489656 OR4X2Q8NGF9 303 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 OR1B1Q8NGR6 318 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 OR4F5Q8NH21 305 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 WFDC12Q8WWY7 111 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
VPS26A-205ENST00000489656 HIGD1AQ9Y241 93 aa10.93□□□□□ -0.66
VPS26A-205ENST00000489656 IL4P05112 153 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 ORM2P19652 201 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 TAS2R45P59539 299 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 SPATA31B1PQ5VZV4 182 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 MIR17HGQ75NE6 70 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 COMMD7Q86VX2 200 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 TECRQ9NZ01 308 aaKnown RBP10.92□□□□□ -0.66
VPS26A-205ENST00000489656 DOK5Q9P104 306 aa10.92□□□□□ -0.66
VPS26A-205ENST00000489656 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
VPS26A-205ENST00000489656 PPP5D1E7EU14 171 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 CXorf1O96002 111 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 LGALS1P09382 135 aaKnown RBP10.91□□□□□ -0.66
VPS26A-205ENST00000489656 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
VPS26A-205ENST00000489656 CCL20P78556 96 aa10.91□□□□□ -0.66
VPS26A-205ENST00000489656 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms