RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 Q8TCH9 128 aa8□□□□□ -1.13
NOD1-208ENST00000489614 RNASE7Q9H1E1 156 aaKnown RBP8□□□□□ -1.13
NOD1-208ENST00000489614 CXXC4Q9H2H0 198 aa8□□□□□ -1.13
NOD1-208ENST00000489614 A6NDN8 102 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 H3BRM9 83 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 PRB1P04280 392 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 SEC11AP67812 179 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 GAGE5Q13069 117 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 GAGE6Q13070 117 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ADIPOQQ15848 244 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 VWC2Q2TAL6 325 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 MS4A5Q9H3V2 200 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 SCRT2Q9NQ03 307 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 CACNG5Q9UF02 275 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 NOTCH2Q04721 2471 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 UBR5O95071 2799 aaPredicted RBP7.99□□□□□ -1.13
NOD1-208ENST00000489614 KBTBD11-OT1A0A1B0GTJ5 212 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.99□□□□□ -1.13
NOD1-208ENST00000489614 SYNGR2O43760 224 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ARPC1AQ92747 370 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 GALMQ96C23 342 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ADGRG4Q8IZF6 3080 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 B9A039 149 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 RDH5Q92781 318 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 RAB40CQ96S21 281 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 SPATA25Q9BR10 227 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 CCL28Q9NRJ3 127 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 TRAPPC2LQ9UL33 140 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 ZNF257Q9Y2Q1 563 aa7.99□□□□□ -1.13
NOD1-208ENST00000489614 DSCAMO60469 2012 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 C2orf91Q6ZV80 131 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 HARBI1Q96MB7 349 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 TMEM140Q9NV12 185 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 IL36RNQ9UBH0 155 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 TNFRSF18Q9Y5U5 241 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 MAP1AP78559 2803 aaPredicted RBP7.98□□□□□ -1.13
NOD1-208ENST00000489614 DCHS2Q6V1P9 2916 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 GNLYP22749 145 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 FA2HQ7L5A8 372 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 Q8IYB0 196 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 OR1L1Q8NH94 360 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
NOD1-208ENST00000489614 NDFIP1Q9BT67 221 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 TNFRSF19Q9NS68 423 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
NOD1-208ENST00000489614 TRBV9A0A0B4J1U6 114 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 TRAV24A0A0B4J272 114 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 E7EQL1 145 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 TNFRSF13BO14836 293 aaPredicted RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 PDCD6O75340 191 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 MT-ND6P03923 174 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 MT-ATP8P03928 68 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 FCGR2BP31994 310 aaPredicted RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 FAM90A1Q86YD7 464 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 ZNF418Q8TF45 676 aaPredicted RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 YAE1D1Q9NRH1 226 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 AKAP6Q13023 2319 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 IGKV1D-13A0A0B4J2D9 117 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 IGHV1-46P01743 117 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 IGKV1-13P0DP09 117 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 RPL31P62899 125 aaKnown RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 TMEM191AQ9H0A3 160 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 CHEK1O14757 476 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 CD24P25063 80 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 CX3CL1P78423 397 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 C11orf71Q6IPW1 123 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 IGFBPL1Q8WX77 278 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 KCNS2Q9ULS6 477 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 FZR1Q9UM11 496 aa7.97□□□□□ -1.13
NOD1-208ENST00000489614 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
NOD1-208ENST00000489614 A0A1W2PPV4 95 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 SRRM5B3KS81 715 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 CAMPP49913 170 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 EDDM3BP56851 147 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 ZNF843Q8N446 348 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 DDB2Q92466 427 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 DPF1Q92782 380 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 C5orf30Q96GV9 206 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 ABHD14BQ96IU4 210 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 ZNF488Q96MN9 340 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 SSBP3Q9BWW4 388 aaPredicted RBP7.96□□□□□ -1.14
NOD1-208ENST00000489614 ZNF331Q9NQX6 463 aaPredicted RBP7.96□□□□□ -1.14
NOD1-208ENST00000489614 V9GYV3 84 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 ARFGEF3Q5TH69 2177 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 FAM90A27PA6NNH2 459 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 TIMM8AO60220 97 aaPredicted RBP7.96□□□□□ -1.14
NOD1-208ENST00000489614 FSTL3O95633 263 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 PSG2P11465 335 aa7.96□□□□□ -1.14
NOD1-208ENST00000489614 PPIFP30405 207 aaKnown RBP7.96□□□□□ -1.14
NOD1-208ENST00000489614 FOXA3P55318 350 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms