RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 AKR1C1Q04828 323 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 FAM90A2PQ658T7 463 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 WFDC3Q8IUB2 231 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 Q8WTZ3 238 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 SMIM8Q96KF7 97 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 C2orf50Q96LR7 162 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 CITED4Q96RK1 184 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 PBDC1Q9BVG4 233 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 RETNQ9HD89 108 aa9.15□□□□□ -0.94
SMARCD3-213ENST00000489503 C7orf66A4D0T2 115 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 OR4C46A6NHA9 309 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 A8MZ25 164 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 NPPCP23582 126 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 CRYBB3P26998 211 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 LYZP61626 148 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 ARL16Q0P5N6 197 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 ZNF124Q15973 351 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 HAGHQ16775 308 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 TMEM14EPQ6UXP3 125 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 GSG1LQ6UXU4 331 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 FAM24BQ8N5W8 94 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 THAP8Q8NA92 274 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 RAB40CQ96S21 281 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 GPN1Q9HCN4 374 aaPredicted RBP9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 U3KQK5 164 aa9.14□□□□□ -0.95
SMARCD3-213ENST00000489503 L7N2F9 121 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 HNRNPCP07910 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 GATA2P23769 480 aaPredicted RBP9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 VAMP2P63027 116 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 RAB32Q13637 225 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 RNF125Q96EQ8 232 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 TRGV9Q99603 122 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 MARVELD1Q9BSK0 173 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 C11orf1Q9H5F2 150 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 U3KQE9 123 aa9.13□□□□□ -0.95
SMARCD3-213ENST00000489503 SNRPGP15A8MWD9 76 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 PRAF2O60831 178 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 TSC22D2O75157 780 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 NHLRC4P0CG21 123 aaPredicted RBP9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 BMI1P35226 326 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 BCAP31P51572 246 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 TMEM182Q6ZP80 229 aaPredicted RBP9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 APRG1Q8IVJ8 170 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 RCHY1Q96PM5 261 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 FAM110AQ9BQ89 295 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
SMARCD3-213ENST00000489503 A0A1W2PS18 150 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 FAM24AA6NFZ4 105 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 CST7O76096 145 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 CAV2P51636 162 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 TAS2R30P59541 319 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 IL15RAQ13261 267 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 LINC00322Q6ZN03 302 aaPredicted RBP9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 NARS2Q96I59 477 aaKnown RBP9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 TM2D3Q9BRN9 247 aa9.11□□□□□ -0.95
SMARCD3-213ENST00000489503 IGSF23A1L1A6 192 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 DNASE2O00115 360 aaPredicted RBP9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 SSNA1O43805 119 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 DLK1P80370 383 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 SLC38A11Q08AI6 406 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 LRRC37A5PQ49AS3 106 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 LEMD1Q68G75 181 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 OR10P1Q8NGE3 313 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 DOK5Q9P104 306 aa9.1□□□□□ -0.95
SMARCD3-213ENST00000489503 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 BUB3O43684 328 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 FABP1P07148 127 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 H2BFSP57053 126 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 DEFB131AP59861 70 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 CYP2G1PQ6ZSU1 146 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 TMEM144Q7Z5S9 345 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 TMEM217Q8N7C4 229 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 PPP1R14BQ96C90 147 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 GGTLC1Q9BX51 225 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 MGAT4CQ9UBM8 478 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 ALG5Q9Y673 324 aa9.09□□□□□ -0.95
SMARCD3-213ENST00000489503 LOC102724200A0A096LPH7 203 aaPredicted RBP9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 K7EQG2 157 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 PTTG1O95997 202 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 ORM2P19652 201 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 PVALBP20472 110 aaPredicted RBP9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 BPIFCQ8NFQ6 507 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 SPATA25Q9BR10 227 aa9.08□□□□□ -0.96
SMARCD3-213ENST00000489503 LYRM2Q9NU23 88 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms