RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SFT2D1Q8WV19 159 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 PFDN5Q99471 154 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 C19orf24Q9BVV8 132 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 DOK5Q9P104 306 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 PFDN2Q9UHV9 154 aa16.18■□□□□ 0.18
SND1-214ENST00000489417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.17■□□□□ 0.18
SND1-214ENST00000489417 MAP1LC3B2A6NCE7 125 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 NDUFA7O95182 113 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 IGHV3-11P01762 117 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 HBE1P02100 147 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 OR5G3P0C626 314 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 PLP1P60201 277 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 KIAA0141Q14154 515 aaPredicted RBP16.17■□□□□ 0.18
SND1-214ENST00000489417 SPSB3Q6PJ21 355 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 LCN15Q6UWW0 184 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 KLHDC1Q8N7A1 406 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 OR51G1Q8NGK1 321 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 LYPD6BQ8NI32 183 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 MYOZ3Q8TDC0 251 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 Q8WTZ3 238 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 GATAD1Q8WUU5 269 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 RAB24Q969Q5 203 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 MAP1LC3BQ9GZQ8 125 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 DNAJC4Q9NNZ3 241 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 MED9Q9NWA0 146 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 MTORP42345 2549 aa16.17■□□□□ 0.18
SND1-214ENST00000489417 EIF3GO75821 320 aaKnown RBP eCLIP16.16■□□□□ 0.18
SND1-214ENST00000489417 RPLP1P05386 114 aaKnown RBP16.16■□□□□ 0.18
SND1-214ENST00000489417 ORM2P19652 201 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 LYZP61626 148 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 FAM78BQ5VT40 261 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 ZNF343Q6P1L6 599 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 PATE2Q6UY27 113 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 ZNF600Q6ZNG1 722 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 OR1B1Q8NGR6 318 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 TMEM37Q8WXS4 190 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 RNF2Q99496 336 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 GNB4Q9HAV0 340 aa16.16■□□□□ 0.18
SND1-214ENST00000489417 ELOA3CA0A087WX78 387 aaPredicted RBP16.15■□□□□ 0.18
SND1-214ENST00000489417 TRAV1-1A0A0B4J248 108 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 A0A1B0GV50 99 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 TEX46H3BTG2 121 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 HYPMO75409 117 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 C10orf113Q5VZT2 155 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 SPATA31B1PQ5VZV4 182 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 ZNF491Q8N8L2 437 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 OR4X2Q8NGF9 303 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 SEPSECSQ9HD40 501 aaKnown RBP16.15■□□□□ 0.18
SND1-214ENST00000489417 FUT9Q9Y231 359 aa16.15■□□□□ 0.18
SND1-214ENST00000489417 NSD1Q96L73 2696 aaPredicted RBP16.15■□□□□ 0.18
SND1-214ENST00000489417 WI2-2373I1.2A0A1W2PRP0 233 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 PPP5D1E7EU14 171 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 HMGB3O15347 200 aaKnown RBP16.14■□□□□ 0.17
SND1-214ENST00000489417 OR2C1O95371 312 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 ARL3P36405 182 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 FAM209BQ5JX69 171 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 COMMD7Q86VX2 200 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 SLC7A5P1Q8MH63 180 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 OR5AU1Q8NGC0 362 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 LINC01006Q8NI28 216 aa16.14■□□□□ 0.17
SND1-214ENST00000489417 MRPL32Q9BYC8 188 aaKnown RBP16.14■□□□□ 0.17
SND1-214ENST00000489417 FN1P02751 2386 aaKnown RBP16.13■□□□□ 0.17
SND1-214ENST00000489417 IL4P05112 153 aa16.13■□□□□ 0.17
SND1-214ENST00000489417 FGF8P55075 233 aaPredicted RBP16.13■□□□□ 0.17
SND1-214ENST00000489417 MIR17HGQ75NE6 70 aa16.13■□□□□ 0.17
SND1-214ENST00000489417 RNF125Q96EQ8 232 aa16.13■□□□□ 0.17
SND1-214ENST00000489417 ZNF414Q96IQ9 312 aa16.13■□□□□ 0.17
SND1-214ENST00000489417 PBDC1Q9BVG4 233 aa16.13■□□□□ 0.17
SND1-214ENST00000489417 PUS1Q9Y606 427 aaKnown RBP eCLIP16.13■□□□□ 0.17
SND1-214ENST00000489417 ANKRD34BA5PLL1 514 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 NUDT19A8MXV4 375 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 TRBV12-3P01733 135 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 RELQ04864 619 aaPredicted RBP16.12■□□□□ 0.17
SND1-214ENST00000489417 IL34Q6ZMJ4 242 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 OR4F5Q8NH21 305 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 WIPF2Q8TF74 440 aaPredicted RBP16.12■□□□□ 0.17
SND1-214ENST00000489417 HIGD1AQ9Y241 93 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 F8P00451 2351 aa16.12■□□□□ 0.17
SND1-214ENST00000489417 IGHV3-35A0A0C4DH35 117 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 STAG3L2P0CL84 134 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 STAG3L3P0CL85 134 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 CCL20P78556 96 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 MARC2Q969Z3 335 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 UBE2E2Q96LR5 201 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 UHRF2Q96PU4 802 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 OR5B12Q96R08 314 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 TECRQ9NZ01 308 aaKnown RBP16.11■□□□□ 0.17
SND1-214ENST00000489417 MRPL27Q9P0M9 148 aaKnown RBP16.11■□□□□ 0.17
SND1-214ENST00000489417 PEF1Q9UBV8 284 aaKnown RBP16.11■□□□□ 0.17
SND1-214ENST00000489417 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
SND1-214ENST00000489417 LINC00305Q7Z4B0 112 aa16.11■□□□□ 0.17
SND1-214ENST00000489417 LGALS1P09382 135 aaKnown RBP16.1■□□□□ 0.17
SND1-214ENST00000489417 C8orf88P0DMB2 117 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 TAS2R45P59539 299 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 USF2Q15853 346 aaPredicted RBP16.1■□□□□ 0.17
SND1-214ENST00000489417 TCTEX1D4Q5JR98 221 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 MORN5Q5VZ52 161 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 TOMM20LQ6UXN7 152 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 ZFAND3Q9H8U3 227 aa16.1■□□□□ 0.17
SND1-214ENST00000489417 BMPR1BO00238 502 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms