RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 CLEC19AQ6UXS0 136 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 SSX7Q7RTT5 188 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 S100A7AQ86SG5 101 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 ZNF329Q86UD4 541 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 OR51G1Q8NGK1 321 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 Q8WTZ3 238 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 ATP6V0BQ99437 205 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 DNAJC4Q9NNZ3 241 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 FUT9Q9Y231 359 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 F8W735 103 aaPredicted RBP7.79□□□□□ -1.16
USP11-211ENST00000489111 TGOLN2O43493 480 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 EIF3GO75821 320 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP11-211ENST00000489111 CXorf1O96002 111 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 IL4P05112 153 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 CLEC3BP05452 202 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 ELANEP08246 267 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 RAB9AP51151 201 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 RELQ04864 619 aaPredicted RBP7.79□□□□□ -1.16
USP11-211ENST00000489111 FOXE3Q13461 319 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 FAM209BQ5JX69 171 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 SPSB3Q6PJ21 355 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 NARS2Q96I59 477 aaKnown RBP7.79□□□□□ -1.16
USP11-211ENST00000489111 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 SEPSECSQ9HD40 501 aaKnown RBP7.79□□□□□ -1.16
USP11-211ENST00000489111 TECRQ9NZ01 308 aaKnown RBP7.79□□□□□ -1.16
USP11-211ENST00000489111 GNG13Q9P2W3 67 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 HIGD1AQ9Y241 93 aa7.79□□□□□ -1.16
USP11-211ENST00000489111 CELSR1Q9NYQ6 3014 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 ACANP16112 2415 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 HIVEP2P31629 2446 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 OR7C2O60412 319 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 IGHV3-11P01762 117 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 CTSGP08311 255 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 PSMB8P28062 276 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 S100A7P31151 101 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 ARL3P36405 182 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 PPT1P50897 306 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 PLP1P60201 277 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 CCL20P78556 96 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 TOR2AQ5JU69 321 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 SPATA31B1PQ5VZV4 182 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 UQCC3Q6UW78 93 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 ZNF600Q6ZNG1 722 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 Q6ZSV7 163 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 MIR17HGQ75NE6 70 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 TMEM37Q8WXS4 190 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 RNF125Q96EQ8 232 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 FAM210AQ96ND0 272 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 CHRDL1Q9BU40 450 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 EIF5A2Q9GZV4 153 aaKnown RBP7.78□□□□□ -1.16
USP11-211ENST00000489111 TREM1Q9NP99 234 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 SERTAD4Q9NUC0 356 aa7.78□□□□□ -1.16
USP11-211ENST00000489111 SONP18583 2426 aaKnown RBP7.77□□□□□ -1.17
USP11-211ENST00000489111 BMPR1BO00238 502 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 TCF21O43680 179 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 CRLF1O75462 422 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 OR2C1O95371 312 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 STAG3L2P0CL84 134 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 STAG3L3P0CL85 134 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 C8orf88P0DMB2 117 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 ADMP35318 185 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 PSMB3P49720 205 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 PEA15Q15121 130 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 GUK1Q16774 197 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 HAGHQ16775 308 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 PQLC2Q6ZP29 291 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 LINC00305Q7Z4B0 112 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 EIF4E3Q8N5X7 224 aaKnown RBP7.77□□□□□ -1.17
USP11-211ENST00000489111 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 OR4X2Q8NGF9 303 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 UHRF2Q96PU4 802 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 MANBALQ9NQG1 85 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 PUS1Q9Y606 427 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP11-211ENST00000489111 BAHCC1Q9P281 2608 aa7.77□□□□□ -1.17
USP11-211ENST00000489111 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.76□□□□□ -1.17
USP11-211ENST00000489111 IGHV3-35A0A0C4DH35 117 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 WI2-2373I1.2A0A1W2PRP0 233 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 ANKRD34BA5PLL1 514 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 PPP5D1E7EU14 171 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 I3L521 148 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
USP11-211ENST00000489111 BCL2P10415 239 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 S100A1P23297 94 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 GCHFRP30047 84 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 TAGLN2P37802 199 aaKnown RBP7.76□□□□□ -1.17
USP11-211ENST00000489111 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
USP11-211ENST00000489111 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 C10orf99Q6UWK7 81 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 PATE2Q6UY27 113 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 KLHDC1Q8N7A1 406 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 ZNF491Q8N8L2 437 aa7.76□□□□□ -1.17
USP11-211ENST00000489111 STXBP6Q8NFX7 210 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms