RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 M0R143 59 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 BLCAPP62952 87 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 GFI1BQ5VTD9 330 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 C16orf82Q7Z2V1 217 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TTC9CQ8N5M4 171 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 ACY3Q96HD9 319 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 PACRGQ96M98 296 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TIMM9Q9Y5J7 89 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 G3V318 75 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 CORTO00230 105 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 PHOX2AO14813 284 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-211ENST00000488912 MPDU1O75352 247 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TSPAN15O95858 294 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 GZMBP10144 247 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 FABP4P15090 132 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
COL21A1-211ENST00000488912 ELLP55199 621 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TEPPQ6URK8 271 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 UNQ5815/PRO19632Q6UWF5 114 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 TMEM144Q7Z5S9 345 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 CENPVQ7Z7K6 275 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-211ENST00000488912 OR5T1Q8NG75 326 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 SLC35E1Q96K37 410 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
COL21A1-211ENST00000488912 MTORP42345 2549 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 TGOLN2O43493 480 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 MT-CO2P00403 227 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 ACSM6Q6P461 480 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 Q6ZS46 218 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF709Q8N972 641 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 RCC1LQ96I51 464 aaKnown RBP8.58□□□□□ -1.04
COL21A1-211ENST00000488912 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 VSIRQ9H7M9 311 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 C17orf112F2Z3M2 114 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 I3L2K1 104 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
COL21A1-211ENST00000488912 NPSP0C0P6 89 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 CAMLGP49069 296 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 SERF2P84101 59 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 ELOBQ15370 118 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF674Q2M3X9 581 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 AKR1C8PQ5T2L2 129 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 SIGLECL1Q8N7X8 197 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 FAM213BQ8TBF2 198 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 NPIPB3Q92617 1050 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
COL21A1-211ENST00000488912 CUBNO60494 3623 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 K7EIM0 57 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 IGHG2P01859 326 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 RND2P52198 227 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 ETFRF1Q6IPR1 90 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 SLC35E3Q7Z769 313 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 FAM110DQ8TAY7 271 aaPredicted RBP8.57□□□□□ -1.04
COL21A1-211ENST00000488912 GCGP01275 180 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 ZNF616Q08AN1 781 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 FFAR4Q5NUL3 377 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 MIC13Q5XKP0 118 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 DUX5Q96PT3 197 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
COL21A1-211ENST00000488912 HIVEP2P31629 2446 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 SOX15O60248 233 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 IGF1P05019 195 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 CXCL1P09341 107 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 HNF1AP20823 631 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 OR10J1P30954 320 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
COL21A1-211ENST00000488912 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM116Q8NCL8 245 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 Q8WTZ3 238 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 EIF5A2Q9GZV4 153 aaKnown RBP8.56□□□□□ -1.04
COL21A1-211ENST00000488912 PXMP4Q9Y6I8 212 aa8.56□□□□□ -1.04
COL21A1-211ENST00000488912 IGKV1D-37A0A075B6S9 117 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 TRAV41A0A0B4J266 112 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 OR2J3O76001 311 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 LY6G6DO95868 133 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 RAB31Q13636 194 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 HAGHQ16775 308 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM41BQ5BJD5 291 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 GCSAMLQ5JQS6 135 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 STPG3Q8N7X2 389 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 S4R3C0 116 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 GATA2P23769 480 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-211ENST00000488912 ERVFC1-1P60608 527 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 TMEM95Q3KNT9 176 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 SLC45A2Q9UMX9 530 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 HIVEP1P15822 2718 aa8.55□□□□□ -1.04
COL21A1-211ENST00000488912 ZFP92A6NM28 416 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 CYB5BO43169 146 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 NDUFB8O95169 186 aa8.54□□□□□ -1.04
COL21A1-211ENST00000488912 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms