RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 OR51G1Q8NGK1 321 aa13.96□□□□□ -0.17
PTCD3-217ENST00000488801 RNF125Q96EQ8 232 aa13.96□□□□□ -0.17
PTCD3-217ENST00000488801 GGACTQ9BVM4 153 aa13.96□□□□□ -0.17
PTCD3-217ENST00000488801 IGHV3OR16-13A0A075B7E8 117 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 IGHV3-74A0A0B4J1X5 117 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 H0YIZ8 118 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 L7N2F9 121 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 PVALBP20472 110 aaPredicted RBP13.95□□□□□ -0.18
PTCD3-217ENST00000488801 NPPCP23582 126 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 BMI1P35226 326 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 VAMP2P63027 116 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 CYCSP99999 105 aaKnown RBP13.95□□□□□ -0.18
PTCD3-217ENST00000488801 GTSCR1Q86UQ5 136 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 OR10P1Q8NGE3 313 aa13.95□□□□□ -0.18
PTCD3-217ENST00000488801 IGSF23A1L1A6 192 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 CD5P06127 495 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 HNRNPCP07910 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCD3-217ENST00000488801 CD81P60033 236 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 GUCA2BQ16661 112 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 DEFB121Q5J5C9 76 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 LAMTOR1Q6IAA8 161 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 RBPMS2Q6ZRY4 209 aaKnown RBP13.94□□□□□ -0.18
PTCD3-217ENST00000488801 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 NEURL2Q9BR09 285 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 MGAT4CQ9UBM8 478 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
PTCD3-217ENST00000488801 HUWE1Q7Z6Z7 4374 aaKnown RBP13.94□□□□□ -0.18
PTCD3-217ENST00000488801 FAM24AA6NFZ4 105 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 FABP1P07148 127 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 IGHV4-30-4P0DP06 118 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 CXCL3P19876 107 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 CAV2P51636 162 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 VWC2Q2TAL6 325 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 STPG3Q8N7X2 389 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 PPP1R1CQ8WVI7 109 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 GLMPQ8WWB7 406 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 TMEM231Q9H6L2 316 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 OR5AC2Q9NZP5 309 aa13.93□□□□□ -0.18
PTCD3-217ENST00000488801 A0A1W2PS18 150 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 BUB3O43684 328 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 P2RY1P47900 373 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 SULT1A1P50225 295 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
PTCD3-217ENST00000488801 SLC38A11Q08AI6 406 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 C16orf54Q6UWD8 224 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 TMEM182Q6ZP80 229 aaPredicted RBP13.92□□□□□ -0.18
PTCD3-217ENST00000488801 TCF24Q7RTU0 167 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
PTCD3-217ENST00000488801 TRAV2A0A0B4J234 112 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 E5RGE8 158 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 DFFBO76075 338 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 MPC2O95563 127 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 CFDP00746 253 aaPredicted RBP13.91□□□□□ -0.18
PTCD3-217ENST00000488801 FRMD6-AS1P0C7T7 363 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 EIF2B2P49770 351 aaKnown RBP13.91□□□□□ -0.18
PTCD3-217ENST00000488801 ODF3L2Q3SX64 289 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
PTCD3-217ENST00000488801 OR11H7Q8NGC8 314 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
PTCD3-217ENST00000488801 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 OR4C46A6NHA9 309 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 CST7O76096 145 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 BCAP31P51572 246 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 PLP1P60201 277 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 OR2F1Q13607 317 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 LRRC37A5PQ49AS3 106 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 TEPPQ6URK8 271 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 CYP2G1PQ6ZSU1 146 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 RNF126Q9BV68 326 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 SLC45A2Q9UMX9 530 aa13.9□□□□□ -0.18
PTCD3-217ENST00000488801 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
PTCD3-217ENST00000488801 LYL1P12980 280 aa13.89□□□□□ -0.19
PTCD3-217ENST00000488801 GATA2P23769 480 aaPredicted RBP13.89□□□□□ -0.19
PTCD3-217ENST00000488801 NUP62P37198 522 aaPredicted RBP13.89□□□□□ -0.19
PTCD3-217ENST00000488801 LYZP61626 148 aa13.89□□□□□ -0.19
PTCD3-217ENST00000488801 FCN2Q15485 313 aa13.89□□□□□ -0.19
PTCD3-217ENST00000488801 STX12Q86Y82 276 aa13.89□□□□□ -0.19
PTCD3-217ENST00000488801 NARS2Q96I59 477 aaKnown RBP13.89□□□□□ -0.19
PTCD3-217ENST00000488801 OR11H12B2RN74 326 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 SELENOTP62341 195 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 EWSR1Q01844 656 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTCD3-217ENST00000488801 TMEM217Q8N7C4 229 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 BPIFCQ8NFQ6 507 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 GRAMD2BQ96HH9 432 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 MGST2Q99735 147 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 MS4A6AQ9H2W1 248 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 WDR83OSQ9Y284 106 aa13.88□□□□□ -0.19
PTCD3-217ENST00000488801 RLN2P04090 185 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 PET100P0DJ07 73 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 S100A11P31949 105 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 HBG1P69891 147 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 HBG2P69892 147 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 DEFB125Q8N687 156 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 DCANP1Q8TF63 244 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 CITED4Q96RK1 184 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 PBDC1Q9BVG4 233 aa13.87□□□□□ -0.19
PTCD3-217ENST00000488801 TMEM147Q9BVK8 224 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms