RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 OR52I2Q8NH67 350 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 RNF125Q96EQ8 232 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 FAM25AB3EWG3 89 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 FAM25CB3EWG5 89 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 FAM25GB3EWG6 89 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 TNFAIP8O95379 198 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 PSMB3P49720 205 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 FAM3BP58499 235 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-206ENST00000488594 FXYD7P58549 80 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 NCS1P62166 190 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 OR8G2PQ6IF36 304 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 MZT2AQ6P582 158 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 ZNF709Q8N972 641 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 MARCH1Q8TCQ1 289 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 GLYATL2Q8WU03 294 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 C15orf40Q8WUR7 153 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 LINC00052Q96N35 136 aa13.54□□□□□ -0.24
GGPS1-206ENST00000488594 C14orf166Q9Y224 244 aaKnown RBP13.54□□□□□ -0.24
GGPS1-206ENST00000488594 DYNC1H1Q14204 4646 aaKnown RBP13.54□□□□□ -0.24
GGPS1-206ENST00000488594 A0A087WXM4 84 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 TEX13DA0A0J9YY54 714 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-206ENST00000488594 NXPH3O95157 252 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 HBE1P02100 147 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 HTN3P15516 51 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 RORCP51449 518 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 TAS2R19P59542 299 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 TMEM229BQ8NBD8 167 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 OR4D10Q8NGI6 311 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 KRTAP4-5Q9BYR2 181 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 NAA60Q9H7X0 242 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 PKD1P98161 4303 aa13.53□□□□□ -0.24
GGPS1-206ENST00000488594 RAB3DO95716 219 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 ZNF79Q15937 498 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 NMSQ5H8A3 153 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 C1orf194Q5T5A4 169 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 SELENOHQ8IZQ5 122 aaKnown RBP13.52□□□□□ -0.25
GGPS1-206ENST00000488594 OR4B1Q8NGF8 309 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 LHFPL5Q8TAF8 219 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 AP3S1Q92572 193 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 GPR146Q96CH1 333 aa13.52□□□□□ -0.25
GGPS1-206ENST00000488594 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
GGPS1-206ENST00000488594 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 VBP1P61758 197 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 PSG9Q00887 426 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 KLF9Q13886 244 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-206ENST00000488594 SURF2Q15527 256 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-206ENST00000488594 SAMD13Q5VXD3 122 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 TMEM268Q5VZI3 342 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 EBLN2Q6P2I7 272 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 C7orf50Q9BRJ6 194 aaKnown RBP13.51□□□□□ -0.25
GGPS1-206ENST00000488594 PBDC1Q9BVG4 233 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 WDR12Q9GZL7 423 aaKnown RBP13.51□□□□□ -0.25
GGPS1-206ENST00000488594 TMED3Q9Y3Q3 217 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 U3KQ87 197 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 ABCA13Q86UQ4 5058 aa13.51□□□□□ -0.25
GGPS1-206ENST00000488594 SOCS3O14543 225 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 PAX9P55771 341 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 DEFB1P60022 68 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
GGPS1-206ENST00000488594 RRN3P1Q2M238 152 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 STEAP1BQ6NZ63 245 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 TMEM88Q6PEY1 159 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 RTBDNQ9BSG5 229 aaPredicted RBP13.5□□□□□ -0.25
GGPS1-206ENST00000488594 FUNDC2Q9BWH2 189 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 SLC35B3Q9H1N7 401 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 PLA2G2EQ9NZK7 142 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 EXTL2Q9UBQ6 330 aa13.5□□□□□ -0.25
GGPS1-206ENST00000488594 ISLRO14498 428 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 FABP1P07148 127 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 SULT1A3P0DMM9 295 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 SULT1A4P0DMN0 295 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 DAD1P61803 113 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 MEF2DQ14814 521 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 GPR107Q5VW38 600 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
GGPS1-206ENST00000488594 ZFP92A6NM28 416 aa13.48□□□□□ -0.25
GGPS1-206ENST00000488594 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
GGPS1-206ENST00000488594 ALDH3B2P48448 385 aa13.48□□□□□ -0.25
GGPS1-206ENST00000488594 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-206ENST00000488594 SSBP1Q04837 148 aaKnown RBP13.48□□□□□ -0.25
GGPS1-206ENST00000488594 IL22RA2Q969J5 263 aa13.48□□□□□ -0.25
GGPS1-206ENST00000488594 CRYM-AS1A6NIL9 109 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 C16orf90A8MZG2 172 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 FAM78BQ5VT40 261 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 GSG1LQ6UXU4 331 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 LGI3Q8N145 548 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 ATG101Q9BSB4 218 aa13.47□□□□□ -0.25
GGPS1-206ENST00000488594 A0A0J9YX75 114 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 GABARAPH6UMI1 98 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 GABARAPO95166 117 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-206ENST00000488594 MEOX2P50222 304 aa13.46□□□□□ -0.25
GGPS1-206ENST00000488594 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms