RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FAM110DQ8TAY7 271 aaPredicted RBP9.99□□□□□ -0.81
NELFE-209ENST00000488426 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 GNG13Q9P2W3 67 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 KLK9Q9UKQ9 250 aa9.99□□□□□ -0.81
NELFE-209ENST00000488426 LOC102723971A0A1B0GUV8 181 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 C9JQL5 133 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 AMY1AP04745 511 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 HIST1H1BP16401 226 aaKnown RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 RBMS3Q6XE24 437 aaKnown RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 RNF2Q99496 336 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 ESM1Q9NQ30 184 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 TNFRSF19Q9NS68 423 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 CARHSP1Q9Y2V2 147 aaKnown RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 NBEAL1Q6ZS30 2694 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 UBE2CO00762 179 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 HSPB1P04792 205 aaKnown RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 S100A9P06702 114 aaKnown RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 STAG3L2P0CL84 134 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 STAG3L3P0CL85 134 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 BCL2P10415 239 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 FOLR2P14207 255 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 PSMB3P49720 205 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 PPT1P50897 306 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 ICAM4Q14773 271 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 HAGHQ16775 308 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 DEFB112Q30KQ8 113 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 UNQ5815/PRO19632Q6UWF5 114 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 GATAD1Q8WUU5 269 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
NELFE-209ENST00000488426 PFDN5Q99471 154 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 MANBALQ9NQG1 85 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
NELFE-209ENST00000488426 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
NELFE-209ENST00000488426 CXorf1O96002 111 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 OR5G3P0C626 314 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 ADCYAP1P18509 176 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 GATA2P23769 480 aaPredicted RBP9.97□□□□□ -0.81
NELFE-209ENST00000488426 LY6EQ16553 131 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 SLC35E3Q7Z769 313 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 OR1L4Q8NGR5 311 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 OR5R1Q8NH85 324 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 RARRES2Q99969 163 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 MRPL32Q9BYC8 188 aaKnown RBP9.97□□□□□ -0.81
NELFE-209ENST00000488426 SLC35B3Q9H1N7 401 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 FUT9Q9Y231 359 aa9.97□□□□□ -0.81
NELFE-209ENST00000488426 IGHV3-21A0A0B4J1V1 117 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 MDFIC2A0A1B0GVS7 189 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 PSMB11A5LHX3 300 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 IGLC1P0CG04 106 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 ZNF90Q03938 601 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 ECSCRQ19T08 205 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 FAM78BQ5VT40 261 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 OR5T1Q8NG75 326 aa9.96□□□□□ -0.81
NELFE-209ENST00000488426 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.81
NELFE-209ENST00000488426 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 NPBWR1P48145 328 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 MFAP4P55083 255 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 DEFA5Q01523 94 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 GUCA2BQ16661 112 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 RNF212Q495C1 297 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 DNAJC4Q9NNZ3 241 aa9.96□□□□□ -0.82
NELFE-209ENST00000488426 TRAV30A0A087WSZ9 112 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 ELOA3CA0A087WX78 387 aaPredicted RBP9.95□□□□□ -0.82
NELFE-209ENST00000488426 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
NELFE-209ENST00000488426 COX7A2P2O60397 106 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 IGHG2P01859 326 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 IGF1P05019 195 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
NELFE-209ENST00000488426 ARL14EPLP0DKL9 152 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 IER3P46695 156 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 TAS2R45P59539 299 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 PLP1P60201 277 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 SVBPQ8N300 66 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 VN1R17PQ8TDU5 208 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 RXFP4Q8TDU9 374 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 TMPRSS5Q9H3S3 457 aa9.95□□□□□ -0.82
NELFE-209ENST00000488426 TECRQ9NZ01 308 aaKnown RBP9.95□□□□□ -0.82
NELFE-209ENST00000488426 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 LINC01548A6NM66 108 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 SCGB2A1O75556 95 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 IGHV4-59P01825 116 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 FCGR2BP31994 310 aaPredicted RBP9.94□□□□□ -0.82
NELFE-209ENST00000488426 HILS1P60008 231 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 C10orf113Q5VZT2 155 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 SPATA31B1PQ5VZV4 182 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 TXN2Q99757 166 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 C21orf62Q9NYP8 219 aa9.94□□□□□ -0.82
NELFE-209ENST00000488426 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms