RNA–Protein interactions for RNA: ENST00000488321.1

TRIM54-204, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-204ENST00000488321 ZNF90Q03938 601 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 ZNF124Q15973 351 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 MUC7Q8TAX7 377 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 SEC22CQ9BRL7 303 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 PSENENQ9NZ42 101 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 TBC1D24Q9ULP9 559 aa11.12□□□□□ -0.63
TRIM54-204ENST00000488321 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
TRIM54-204ENST00000488321 CCSO14618 274 aa11.11□□□□□ -0.63
TRIM54-204ENST00000488321 OR2F1Q13607 317 aa11.11□□□□□ -0.63
TRIM54-204ENST00000488321 ZBTB8BQ8NAP8 495 aaPredicted RBP11.11□□□□□ -0.63
TRIM54-204ENST00000488321 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
TRIM54-204ENST00000488321 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
TRIM54-204ENST00000488321 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
TRIM54-204ENST00000488321 IGKV1D-37A0A075B6S9 117 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 HELTA6NFD8 242 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 C3orf84H3BNL1 204 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 UPK1BO75841 260 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 DEFB131AP59861 70 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 LYZP61626 148 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 AKR1C1Q04828 323 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 ASAH1Q13510 395 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 OR8G2PQ6IF36 304 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 ENKURQ8TC29 256 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 U3KQE9 123 aa11.1□□□□□ -0.63
TRIM54-204ENST00000488321 TRAV2A0A0B4J234 112 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 C5orf51A6NDU8 294 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 SNRPGP15A8MWD9 76 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 ACOT7LQ6ZUV0 252 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 C12orf45Q8N5I9 185 aaPredicted RBP11.09□□□□□ -0.63
TRIM54-204ENST00000488321 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 SMIM8Q96KF7 97 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 TRGV9Q99603 122 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
TRIM54-204ENST00000488321 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 LYL1P12980 280 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
TRIM54-204ENST00000488321 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
TRIM54-204ENST00000488321 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 PPP1R14BQ96C90 147 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
TRIM54-204ENST00000488321 IGKV1OR2-108A0A075B7D4 117 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 K7EQG2 157 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 L7N2F9 121 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 UBE2CO00762 179 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 BUB3O43684 328 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 MBPP02686 304 aaPredicted RBP11.07□□□□□ -0.64
TRIM54-204ENST00000488321 METTL15P1P0C7V9 234 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 PAX9P55771 341 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 RRAS2P62070 204 aaPredicted RBP11.07□□□□□ -0.64
TRIM54-204ENST00000488321 VAMP2P63027 116 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 DEFB135Q30KP9 77 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 LSM5Q9Y4Y9 91 aaKnown RBP11.07□□□□□ -0.64
TRIM54-204ENST00000488321 NBEAL2Q6ZNJ1 2754 aa11.07□□□□□ -0.64
TRIM54-204ENST00000488321 CCNKO75909 580 aa11.06□□□□□ -0.64
TRIM54-204ENST00000488321 IFITM3Q01628 133 aa11.06□□□□□ -0.64
TRIM54-204ENST00000488321 ZFAND6Q6FIF0 208 aa11.06□□□□□ -0.64
TRIM54-204ENST00000488321 Q6ZWC4 215 aa11.06□□□□□ -0.64
TRIM54-204ENST00000488321 DCANP1Q8TF63 244 aa11.06□□□□□ -0.64
TRIM54-204ENST00000488321 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
TRIM54-204ENST00000488321 SPRY2O43597 315 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 TSC22D2O75157 780 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 CFDP00746 253 aaPredicted RBP11.05□□□□□ -0.64
TRIM54-204ENST00000488321 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
TRIM54-204ENST00000488321 BCAP31P51572 246 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 TAS2R30P59541 319 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 TMEM14EPQ6UXP3 125 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 GSG1LQ6UXU4 331 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 STHQ8IWL8 128 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 BPIFCQ8NFQ6 507 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 OR10P1Q8NGE3 313 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 GPN1Q9HCN4 374 aaPredicted RBP11.05□□□□□ -0.64
TRIM54-204ENST00000488321 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 MGAT4CQ9UBM8 478 aa11.05□□□□□ -0.64
TRIM54-204ENST00000488321 C7orf66A4D0T2 115 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 IL5P05113 134 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 ORM2P19652 201 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 S100A10P60903 97 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 PSMG4Q5JS54 123 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 NRARPQ7Z6K4 114 aa11.04□□□□□ -0.64
TRIM54-204ENST00000488321 C2orf50Q96LR7 162 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms