RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 MFFQ9GZY8 342 aa14.06□□□□□ -0.16
CD55-209ENST00000488171 DUXBA0A1W2PPF3 345 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 IFNA4P05014 189 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
CD55-209ENST00000488171 AP3S2P59780 193 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 GAMTQ14353 236 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 TMEM41BQ5BJD5 291 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 PSMG4Q5JS54 123 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 OR51G1Q8NGK1 321 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 RAB40CQ96S21 281 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 FBXL17Q9UF56 701 aa14.05□□□□□ -0.16
CD55-209ENST00000488171 IGKV1D-37A0A075B6S9 117 aa14.04□□□□□ -0.16
CD55-209ENST00000488171 FAM90A26D6RGX4 464 aa14.04□□□□□ -0.16
CD55-209ENST00000488171 GPX4P36969 197 aaPredicted RBP14.04□□□□□ -0.16
CD55-209ENST00000488171 SIGLEC15Q6ZMC9 328 aa14.04□□□□□ -0.16
CD55-209ENST00000488171 LRTM2Q8N967 370 aa14.04□□□□□ -0.16
CD55-209ENST00000488171 NRN1Q9NPD7 142 aa14.04□□□□□ -0.16
CD55-209ENST00000488171 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 RBMY1A1P0DJD3 496 aaKnown RBP14.03□□□□□ -0.16
CD55-209ENST00000488171 RBMY1CP0DJD4 496 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 ZNF90Q03938 601 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 RBMY1FQ15415 496 aaKnown RBP14.03□□□□□ -0.16
CD55-209ENST00000488171 CCDC190Q86UF4 302 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 CSNK1G2-AS1Q8NCQ2 148 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 RNF125Q96EQ8 232 aa14.03□□□□□ -0.16
CD55-209ENST00000488171 IGHV4-28A0A0C4DH34 117 aa14.02□□□□□ -0.17
CD55-209ENST00000488171 ZNF705EA8MWA4 302 aaPredicted RBP14.02□□□□□ -0.17
CD55-209ENST00000488171 VAMP1P23763 118 aa14.02□□□□□ -0.17
CD55-209ENST00000488171 DEDD2Q8WXF8 326 aa14.02□□□□□ -0.17
CD55-209ENST00000488171 SLC25A21Q9BQT8 299 aaPredicted RBP14.02□□□□□ -0.17
CD55-209ENST00000488171 SEPSECSQ9HD40 501 aaKnown RBP14.02□□□□□ -0.17
CD55-209ENST00000488171 CLEC5AQ9NY25 188 aa14.02□□□□□ -0.17
CD55-209ENST00000488171 X6R8D5 127 aa14.02□□□□□ -0.17
CD55-209ENST00000488171 CCDC160A6NGH7 325 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 ZFP92A6NM28 416 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 IAPPP10997 89 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 SLC25A6P12236 298 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 S100A5P33763 92 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 SNRPD3P62318 126 aaKnown RBP14.01□□□□□ -0.17
CD55-209ENST00000488171 PPP1R1AQ13522 171 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 SLC35E1Q96K37 410 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
CD55-209ENST00000488171 RBM38Q9H0Z9 239 aaKnown RBP14.01□□□□□ -0.17
CD55-209ENST00000488171 SFT2D2O95562 160 aa14□□□□□ -0.17
CD55-209ENST00000488171 MIFP14174 115 aa14□□□□□ -0.17
CD55-209ENST00000488171 LGALS9CQ6DKI2 356 aa14□□□□□ -0.17
CD55-209ENST00000488171 OR8G2PQ6IF36 304 aa14□□□□□ -0.17
CD55-209ENST00000488171 HRH4Q9H3N8 390 aa14□□□□□ -0.17
CD55-209ENST00000488171 NUP62P37198 522 aaPredicted RBP13.99□□□□□ -0.17
CD55-209ENST00000488171 RPP25LQ8N5L8 163 aaKnown RBP13.99□□□□□ -0.17
CD55-209ENST00000488171 TMED3Q9Y3Q3 217 aa13.99□□□□□ -0.17
CD55-209ENST00000488171 IGKV1OR2-108A0A075B7D4 117 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 H3BMM0 161 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 RAB11AP62491 216 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 C2CD4CQ8TF44 421 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 TBC1D24Q9ULP9 559 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 KMT2AQ03164 3969 aa13.98□□□□□ -0.17
CD55-209ENST00000488171 ELOA3CA0A087WX78 387 aaPredicted RBP13.97□□□□□ -0.17
CD55-209ENST00000488171 DEDDO75618 318 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 LYZP61626 148 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 CENPSQ8N2Z9 138 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 TRGV9Q99603 122 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 WDR12Q9GZL7 423 aaKnown RBP13.97□□□□□ -0.17
CD55-209ENST00000488171 SRRQ9GZT4 340 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 MAGT1Q9H0U3 335 aa13.97□□□□□ -0.17
CD55-209ENST00000488171 PRSS46E5RG02 174 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 SYNGR2O43760 224 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 MED6O75586 246 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 FABP1P07148 127 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 HOXB5P09067 269 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 HLA-DRB4P13762 266 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 NKX2-1P43699 371 aaPredicted RBP13.96□□□□□ -0.17
CD55-209ENST00000488171 OR2F1Q13607 317 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 GGNBP1Q5YKI7 109 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 THAP8Q8NA92 274 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 PFDN2Q9UHV9 154 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
CD55-209ENST00000488171 HLA-DRB4X5D2U9 266 aa13.96□□□□□ -0.17
CD55-209ENST00000488171 SNRPGP15A8MWD9 76 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 WRBO00258 174 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 SOCS3O14543 225 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 DEFB1P60022 68 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 C1orf194Q5T5A4 169 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 GDF5OSQ5U4N7 250 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 CIB3Q96Q77 187 aaPredicted RBP13.96□□□□□ -0.18
CD55-209ENST00000488171 XCL2Q9UBD3 114 aa13.96□□□□□ -0.18
CD55-209ENST00000488171 C11orf94C9JXX5 98 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 ZNF701M0R085 212 aaPredicted RBP13.95□□□□□ -0.18
CD55-209ENST00000488171 HLA-DMBP28068 263 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 NUTF2P61970 127 aaKnown RBP13.95□□□□□ -0.18
CD55-209ENST00000488171 BAK1Q16611 211 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 SPANXN2Q5MJ10 180 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 GSG1LQ6UXU4 331 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 C1QTNF4Q9BXJ3 329 aa13.95□□□□□ -0.18
CD55-209ENST00000488171 TCTAP57738 103 aa13.94□□□□□ -0.18
CD55-209ENST00000488171 UBE2MP61081 183 aaKnown RBP13.94□□□□□ -0.18
CD55-209ENST00000488171 Q6ZTC4 211 aa13.94□□□□□ -0.18
CD55-209ENST00000488171 APLNQ9ULZ1 77 aa13.94□□□□□ -0.18
CD55-209ENST00000488171 CELA1Q9UNI1 258 aa13.94□□□□□ -0.18
CD55-209ENST00000488171 C9orf170A2RU37 121 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms