RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TRGV10A0A0A0MS01 117 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 BORCS7-ASMTA0A0B4J1R7 106 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 TLCD2A6NGC4 264 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM212A6NML5 194 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 H7C2G1 150 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 J3KT08 172 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 DEGS1O15121 323 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 DBIP07108 87 aaKnown RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 SRP9P49458 86 aaKnown RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 EVX1P49640 407 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPS28P62857 69 aaKnown RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 UBE2BP63146 152 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 MYL5Q02045 173 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 PLCXD2Q0VAA5 305 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 RTL8BQ17RB0 113 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 KHDC3LQ587J8 217 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPS19BP1Q86WX3 136 aaKnown RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 LRRC28Q86X40 367 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 DYNAPQ8N1N2 210 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPP25LQ8N5L8 163 aaKnown RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR4D11Q8NGI4 311 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM106AQ96A25 262 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 CCDC115Q96NT0 180 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 GPX7Q96SL4 187 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 HIST1H2BLQ99880 126 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 TIMM21Q9BVV7 248 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM133Q9H2Q1 129 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 CST9LQ9H4G1 147 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 RASL12Q9NYN1 266 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 JPT1Q9UK76 154 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 EPDR1Q9UM22 224 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 ADGRB3O60242 1522 aa1.4□□□□□ -2.19
HMGB1P36-201ENST00000487709 ARHGAP32A7KAX9 2087 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 REREQ9P2R6 1566 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 COL11A1P12107 1806 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRAV7A0A075B6U4 112 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 A0A0D9SG52 128 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 A0A1B0GVG6 124 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 M0R378 163 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 BCL2P10415 239 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 POLR2HP52434 150 aaKnown RBP1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 FXYD2P54710 66 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 SLC38A11Q08AI6 406 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 NDUFA5Q16718 116 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 CCDC58Q4VC31 144 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 C22orf39Q6P5X5 142 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 SIGLECL1Q8N7X8 197 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR52R1Q8NGF1 315 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR5A1Q8NGJ0 315 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 PFN4Q8NHR9 129 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 STAG3L4Q8TBR4 150 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 BORCS8Q96FH0 119 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 TEX37Q96LM6 180 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 TSC22D3Q99576 134 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 YIPF3Q9GZM5 350 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM126AQ9H061 195 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 NHP2Q9NX24 153 aaKnown RBP1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 MED31Q9Y3C7 131 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZCCHC11Q5TAX3 1644 aaKnown RBP1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 HECW1Q76N89 1606 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 PLXNA3P51805 1871 aa1.39□□□□□ -2.19
HMGB1P36-201ENST00000487709 CAMSAP2Q08AD1 1489 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 CPDO75976 1380 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 A0A0D9SEW6 157 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRBV10-2A0A0K0K1G8 114 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 A0A1B0GX51 115 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRDV1A0A1B0GX56 115 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 C7orf71A4D174 169 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM189A5PLL7 270 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 MEIS3P1A6NDR6 274 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM256-PLSCR3K7ERE1 68 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR2T1O43869 369 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 CST7O76096 145 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 HTR1AP08908 422 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 METTL15P1P0C7V9 234 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 RPL7P18124 248 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 S100A11P31949 105 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 NDUFA6P56556 154 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 SUPT4H1P63272 117 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 OR8B8Q15620 311 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 KISS1Q15726 138 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 DEFB115Q30KQ5 88 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 C1orf140Q5VVS0 124 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 COA5Q86WW8 74 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 PRR15Q8IV56 129 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TMEM229BQ8NBD8 167 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 ZNF563Q8TA94 476 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 WFDC5Q8TCV5 224 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 SLC25A21Q9BQT8 299 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 ADAT1Q9BUB4 502 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 MRPL32Q9BYC8 188 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TCEAL2Q9H3H9 227 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TRAPPC2LQ9UL33 140 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TOPBP1Q92547 1522 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 KDM5BQ9UGL1 1544 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 TECPR2O15040 1411 aa1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 DICER1Q9UPY3 1922 aaKnown RBP1.38□□□□□ -2.19
HMGB1P36-201ENST00000487709 NAV1Q8NEY1 1877 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms