RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TRAV30A0A087WSZ9 112 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 C8orf88P0DMB2 117 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 TAS2R45P59539 299 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 BLCAPP62952 87 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 SOHLH1Q5JUK2 328 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 FAM90A2PQ658T7 463 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 SUN5Q8TC36 379 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 UHRF2Q96PU4 802 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 TXN2Q99757 166 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF580Q9UK33 172 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
SF3B1-211ENST00000487698 BRI3O95415 125 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 TOMM40O96008 361 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 FABP1P07148 127 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 YPEL3P61236 119 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-211ENST00000487698 RHOGP84095 191 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 C9orf152Q5JTZ5 239 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 Q6ZS46 218 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 NECAP1Q8NC96 275 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF502Q8TBZ5 544 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 NKX6-2Q9C056 277 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF355PQ9NSJ1 428 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 VPREB3Q9UKI3 123 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 ARL2-SNX15V9GYD0 113 aa7.37□□□□□ -1.23
SF3B1-211ENST00000487698 TRAV5A0A0B4J249 113 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 TMEM250H0YL14 139 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 GNG7O60262 68 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 HYPMO75409 117 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 SNAPINO95295 136 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 RD3LP0DJH9 198 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
SF3B1-211ENST00000487698 LINC00305Q7Z4B0 112 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR1B1Q8NGR6 318 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 TMEM167BQ9NRX6 74 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR7C2O60412 319 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 CTSGP08311 255 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 ORM2P19652 201 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 ATP5G3P48201 142 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 UBE2G2P60604 165 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 Q56UQ5 140 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 TEX29Q8N6K0 151 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 CLRN3Q8NCR9 226 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR5AU1Q8NGC0 362 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR51G1Q8NGK1 321 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR4F5Q8NH21 305 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF414Q96IQ9 312 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 OR4F4Q96R69 305 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
SF3B1-211ENST00000487698 LINC00527Q9UJ94 153 aa7.36□□□□□ -1.23
SF3B1-211ENST00000487698 YTHDF2Q9Y5A9 579 aaKnown RBP7.36□□□□□ -1.23
SF3B1-211ENST00000487698 WI2-2373I1.2A0A1W2PRP0 233 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 FAM223BA6NKX1 122 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 FAM74A7A6NL05 159 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 H3BUA1 57 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 AP4M1O00189 453 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 CD5LO43866 347 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 OR2C1O95371 312 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 ADMP35318 185 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 LYZP61626 148 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 CFHR3Q02985 330 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF491Q8N8L2 437 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 RNF125Q96EQ8 232 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 NOL4LQ96MY1 436 aaPredicted RBP7.35□□□□□ -1.23
SF3B1-211ENST00000487698 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
SF3B1-211ENST00000487698 OR2T8A6NH00 312 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 PDE6DO43924 150 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 CEBPGP53567 150 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 ATP6V0BQ99437 205 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 NOTCH2Q04721 2471 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 H3BQ15 152 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-211ENST00000487698 SCGB2A1O75556 95 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 IGLV1-40P01703 118 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 OR10J4P0C629 311 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 PYYP10082 97 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 GP9P14770 177 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 NPPCP23582 126 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
SF3B1-211ENST00000487698 AWAT1Q58HT5 328 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 CST9LP1Q5W188 147 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 MS4A10Q96PG2 267 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 CHRDL1Q9BU40 450 aa7.34□□□□□ -1.23
SF3B1-211ENST00000487698 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
SF3B1-211ENST00000487698 TRBV7-1A0A0A6YYK4 115 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 A0A1W2PRE2 83 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 F6UZH7 168 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 H3BRN7 92 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 IL4P05112 153 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 GPR183P32249 361 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 BTN1A1Q13410 526 aa7.33□□□□□ -1.24
SF3B1-211ENST00000487698 KIAA0141Q14154 515 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms