RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 VAMP1P23763 118 aa17.19■□□□□ 0.34
PLOD3-215ENST00000487563 NUP62P37198 522 aaPredicted RBP17.19■□□□□ 0.34
PLOD3-215ENST00000487563 ATP5IP56385 69 aaPredicted RBP17.19■□□□□ 0.34
PLOD3-215ENST00000487563 SIGLEC15Q6ZMC9 328 aa17.19■□□□□ 0.34
PLOD3-215ENST00000487563 TRIM63Q969Q1 353 aa17.19■□□□□ 0.34
PLOD3-215ENST00000487563 NRN1Q9NPD7 142 aa17.19■□□□□ 0.34
PLOD3-215ENST00000487563 PFDN2Q9UHV9 154 aa17.19■□□□□ 0.34
PLOD3-215ENST00000487563 DUXBA0A1W2PPF3 345 aa17.18■□□□□ 0.34
PLOD3-215ENST00000487563 S100A5P33763 92 aa17.18■□□□□ 0.34
PLOD3-215ENST00000487563 TMEM128Q5BJH2 165 aa17.18■□□□□ 0.34
PLOD3-215ENST00000487563 RNF125Q96EQ8 232 aa17.18■□□□□ 0.34
PLOD3-215ENST00000487563 AGRNO00468 2067 aa17.17■□□□□ 0.34
PLOD3-215ENST00000487563 FAM90A26D6RGX4 464 aa17.17■□□□□ 0.34
PLOD3-215ENST00000487563 BUB3O43684 328 aa17.17■□□□□ 0.34
PLOD3-215ENST00000487563 GIG44P09565 113 aaPredicted RBP17.17■□□□□ 0.34
PLOD3-215ENST00000487563 Q8NAQ8 132 aa17.17■□□□□ 0.34
PLOD3-215ENST00000487563 RAB40CQ96S21 281 aa17.17■□□□□ 0.34
PLOD3-215ENST00000487563 PAIP2BQ9ULR5 123 aaKnown RBP17.17■□□□□ 0.34
PLOD3-215ENST00000487563 IGHV4-28A0A0C4DH34 117 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 FABP1P07148 127 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 MIFP14174 115 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 GPX4P36969 197 aaPredicted RBP17.16■□□□□ 0.34
PLOD3-215ENST00000487563 RAB11AP62491 216 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 CLEC5AQ9NY25 188 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 V9GYH0 126 aa17.16■□□□□ 0.34
PLOD3-215ENST00000487563 IAPPP10997 89 aa17.15■□□□□ 0.34
PLOD3-215ENST00000487563 GAMTQ14353 236 aa17.15■□□□□ 0.34
PLOD3-215ENST00000487563 CENPSQ8N2Z9 138 aa17.15■□□□□ 0.34
PLOD3-215ENST00000487563 C2CD4CQ8TF44 421 aa17.15■□□□□ 0.34
PLOD3-215ENST00000487563 SLC25A21Q9BQT8 299 aaPredicted RBP17.15■□□□□ 0.34
PLOD3-215ENST00000487563 LYZP61626 148 aa17.14■□□□□ 0.33
PLOD3-215ENST00000487563 NUTF2P61970 127 aaKnown RBP17.14■□□□□ 0.33
PLOD3-215ENST00000487563 LGALS9CQ6DKI2 356 aa17.14■□□□□ 0.33
PLOD3-215ENST00000487563 OR8G2PQ6IF36 304 aa17.14■□□□□ 0.33
PLOD3-215ENST00000487563 SEPSECSQ9HD40 501 aaKnown RBP17.14■□□□□ 0.33
PLOD3-215ENST00000487563 TBC1D24Q9ULP9 559 aa17.14■□□□□ 0.33
PLOD3-215ENST00000487563 PITX3O75364 302 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 MED6O75586 246 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 ZNF90Q03938 601 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 ZNF79Q15937 498 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 DEDD2Q8WXF8 326 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 PPP1R14BQ96C90 147 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 C1QTNF4Q9BXJ3 329 aa17.13■□□□□ 0.33
PLOD3-215ENST00000487563 ZNF705EA8MWA4 302 aaPredicted RBP17.12■□□□□ 0.33
PLOD3-215ENST00000487563 RBMY1A1P0DJD3 496 aaKnown RBP17.12■□□□□ 0.33
PLOD3-215ENST00000487563 RBMY1CP0DJD4 496 aa17.12■□□□□ 0.33
PLOD3-215ENST00000487563 SLC25A6P12236 298 aa17.12■□□□□ 0.33
PLOD3-215ENST00000487563 RBMY1FQ15415 496 aaKnown RBP17.12■□□□□ 0.33
PLOD3-215ENST00000487563 LRTM2Q8N967 370 aa17.12■□□□□ 0.33
PLOD3-215ENST00000487563 HRH4Q9H3N8 390 aa17.12■□□□□ 0.33
PLOD3-215ENST00000487563 TMED3Q9Y3Q3 217 aa17.12■□□□□ 0.33
PLOD3-215ENST00000487563 IGKV1D-37A0A075B6S9 117 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 C11orf94C9JXX5 98 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 DEDDO75618 318 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 SFT2D2O95562 160 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 RPP30P78346 268 aaKnown RBP17.11■□□□□ 0.33
PLOD3-215ENST00000487563 PPP1R1AQ13522 171 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 OR2F1Q13607 317 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 RPP25LQ8N5L8 163 aaKnown RBP17.11■□□□□ 0.33
PLOD3-215ENST00000487563 CIB3Q96Q77 187 aaPredicted RBP17.11■□□□□ 0.33
PLOD3-215ENST00000487563 X6R8D5 127 aa17.11■□□□□ 0.33
PLOD3-215ENST00000487563 SNRPGP15A8MWD9 76 aa17.1■□□□□ 0.33
PLOD3-215ENST00000487563 TCTAP57738 103 aa17.1■□□□□ 0.33
PLOD3-215ENST00000487563 XCL2Q9UBD3 114 aa17.1■□□□□ 0.33
PLOD3-215ENST00000487563 IGLL5B9A064 214 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 H3BMM0 161 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 HOXB5P09067 269 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 HLA-DMBP28068 263 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 ID1P41134 155 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 NKX2-1P43699 371 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-215ENST00000487563 INPP1P49441 399 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 SPANXN2Q5MJ10 180 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 CCDC190Q86UF4 302 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 CSNK1G2-AS1Q8NCQ2 148 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 COQ8AQ8NI60 647 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 LINC00052Q96N35 136 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 TRGV9Q99603 122 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 MAGT1Q9H0U3 335 aa17.09■□□□□ 0.33
PLOD3-215ENST00000487563 WRBO00258 174 aa17.08■□□□□ 0.32
PLOD3-215ENST00000487563 SYNGR2O43760 224 aa17.08■□□□□ 0.32
PLOD3-215ENST00000487563 HLA-DRB4P13762 266 aa17.08■□□□□ 0.32
PLOD3-215ENST00000487563 C1orf194Q5T5A4 169 aa17.08■□□□□ 0.32
PLOD3-215ENST00000487563 HLA-DRB4X5D2U9 266 aa17.08■□□□□ 0.32
PLOD3-215ENST00000487563 ELOA3CA0A087WX78 387 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-215ENST00000487563 IGKV3-20P01619 116 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 PSMB3P49720 205 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 GGNBP1Q5YKI7 109 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 Q6ZTC4 211 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 OR8I2Q8N0Y5 310 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 THAP8Q8NA92 274 aa17.06■□□□□ 0.32
PLOD3-215ENST00000487563 WDR12Q9GZL7 423 aaKnown RBP17.06■□□□□ 0.32
PLOD3-215ENST00000487563 TRAV10A0A0B4J240 114 aa17.05■□□□□ 0.32
PLOD3-215ENST00000487563 CFDP00746 253 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-215ENST00000487563 UBE2MP61081 183 aaKnown RBP17.05■□□□□ 0.32
PLOD3-215ENST00000487563 SPANXN5Q5MJ07 72 aa17.05■□□□□ 0.32
PLOD3-215ENST00000487563 TRIQKQ629K1 86 aa17.05■□□□□ 0.32
PLOD3-215ENST00000487563 H3BP45 60 aa17.04■□□□□ 0.32
PLOD3-215ENST00000487563 AKR1C1Q04828 323 aa17.04■□□□□ 0.32
PLOD3-215ENST00000487563 FOXI2Q6ZQN5 318 aa17.04■□□□□ 0.32
PLOD3-215ENST00000487563 SRRQ9GZT4 340 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms