RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 BMI1P35226 326 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 Q0VG73 95 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 TBR1Q16650 682 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 KIR3DL3Q8N743 410 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 hADV38S2A0JD32 116 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 COX19Q49B96 90 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 PRNTQ86SH4 94 aa10.11□□□□□ -0.79
SHROOM3-208ENST00000486758 CHD6Q8TD26 2715 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 IZUMO1RA6ND01 250 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 ZNF883P0CG24 379 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 TMEM108Q6UXF1 575 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 SAA2-SAA4A0A096LPE2 208 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 MORN2Q502X0 79 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 Q6ZSR3 168 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 GCSAMQ8N6F7 178 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 RAB9BQ9NP90 201 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 MBNL3Q9NUK0 354 aaKnown RBP10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 LYNX1G3V0Z9 82 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 J3QW42 95 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 CRYABP02511 175 aaKnown RBP10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 LYNX1P0DP58 116 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 NUDT10Q8NFP7 164 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 NUDT11Q96G61 164 aa10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
SHROOM3-208ENST00000486758 DYSFO75923 2080 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 CSPG4Q6UVK1 2322 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 IGKV1D-17A0A075B6S4 117 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 TRBV6-6A0A0A6YYG2 114 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 ITGB1BP1O14713 200 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 SS18L1O75177 396 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 PAX1P15863 534 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 LYZP61626 148 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 RBX1P62877 108 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 C12orf54Q6X4T0 127 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 WDR31Q8NA23 367 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 CST9LQ9H4G1 147 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 OSTCQ9NRP0 149 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 H3BUT2 72 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 NDUFB3O43676 98 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 ARF6P62330 175 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 RAB1CQ92928 201 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 SFXN3Q9BWM7 321 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 HCFC1P51610 2035 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 SLC25A17O43808 307 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 MSRB2Q9Y3D2 182 aa10.09□□□□□ -0.79
SHROOM3-208ENST00000486758 TNFRSF1AP19438 455 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 UTF1Q5T230 341 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 CENPVQ7Z7K6 275 aaPredicted RBP10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 SPACA3Q8IXA5 215 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 S4R3C0 116 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 TMEM8BA6NDV4 472 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 PEX7O00628 323 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 BRWD1-AS2P59051 145 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 TNFRSF19Q9NS68 423 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 RBP4P02753 201 aa10.08□□□□□ -0.8
SHROOM3-208ENST00000486758 GAGE12BA1L429 117 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 C9JCJ5 164 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 LINC00305Q7Z4B0 112 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 FAM90A1Q86YD7 464 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 CENPEQ02224 2701 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 A0A1W2PRE2 83 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 C7orf71A4D174 169 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 AREGP15514 252 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 ZNF134P52741 427 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 HBBP68871 147 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 OCIAD2Q56VL3 154 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 SP5Q6BEB4 398 aaPredicted RBP10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 ARHGAP32A7KAX9 2087 aa10.07□□□□□ -0.8
SHROOM3-208ENST00000486758 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 A8MWL6 223 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 NPIPB11E5RHQ5 1161 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 K7EM74 188 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 LRRC10Q5BKY1 277 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 C18orf15Q96N68 181 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 HLA-DRB1P01911 266 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A6P0DMU7 189 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A5P0DMU8 189 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A7P0DMV0 189 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 ERVK11-1P61568 191 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A1Q5HYN5 189 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 CT45A3Q8NHU0 189 aa10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 SRSF12Q8WXF0 261 aaKnown RBP10.06□□□□□ -0.8
SHROOM3-208ENST00000486758 JPT1Q9UK76 154 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms