RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TMEM133Q9H2Q1 129 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 PCF11O94913 1555 aaKnown RBP1.43□□□□□ -2.18
SMC4-218ENST00000486711 TRGV10A0A0A0MS01 117 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 GEMIN2O14893 280 aaKnown RBP1.43□□□□□ -2.18
SMC4-218ENST00000486711 PLCXD2Q0VAA5 305 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 HACD4Q5VWC8 232 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 SLC30A7Q8NEW0 376 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 SLAMF6Q96DU3 332 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 MRPL57Q9BQC6 102 aaKnown RBP1.43□□□□□ -2.18
SMC4-218ENST00000486711 PRADC1Q9BSG0 188 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 BCL2L10Q9HD36 194 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 C14orf132Q9NPU4 83 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 ACER3Q9NUN7 267 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 STOML2Q9UJZ1 356 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 STRCQ7RTU9 1775 aa1.43□□□□□ -2.18
SMC4-218ENST00000486711 CST8O60676 142 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 LYZL6O75951 148 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 CYBAP13498 195 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 ZNF93P35789 620 aaPredicted RBP1.42□□□□□ -2.18
SMC4-218ENST00000486711 C4orf3Q8WVX3 66 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 RASL12Q9NYN1 266 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 PYCARDQ9ULZ3 195 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 ECM29Q5VYK3 1845 aa1.42□□□□□ -2.18
SMC4-218ENST00000486711 NDUFC2O95298 119 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 DYNLT1P63172 113 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 DHRS4L2Q6PKH6 230 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 STAG3L4Q8TBR4 150 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 LINC00467Q9BRT7 94 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 MED13Q9UHV7 2174 aa1.41□□□□□ -2.18
SMC4-218ENST00000486711 TRBV6-8A0A0A6YYG3 113 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 AIPO00170 330 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 TAX1BP3O14907 124 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 ATG12O94817 140 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 GADD45GO95257 159 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 RNASE4P34096 147 aaKnown RBP1.4□□□□□ -2.19
SMC4-218ENST00000486711 NCALDP61601 193 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 MYL5Q02045 173 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 C22orf39Q6P5X5 142 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 PDZD9Q8IXQ8 264 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 C3orf56Q8N813 242 aa1.4□□□□□ -2.19
SMC4-218ENST00000486711 PRRC2BQ5JSZ5 2229 aaKnown RBP1.4□□□□□ -2.19
SMC4-218ENST00000486711 TRBV6-7A0A0A0MS04 114 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 G3V2T6 193 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 NDUFB3O43676 98 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 TIMM17BO60830 172 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 GGCTO75223 188 aaKnown RBP1.39□□□□□ -2.19
SMC4-218ENST00000486711 BANF1O75531 89 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 CTAG1AP78358 180 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 TMEM254Q8TBM7 123 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 ODF3Q96PU9 254 aa1.39□□□□□ -2.19
SMC4-218ENST00000486711 ANAPC1Q9H1A4 1944 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 MYOFQ9NZM1 2061 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 SCN10AQ9Y5Y9 1956 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 ZNF106Q9H2Y7 1883 aaKnown RBP1.38□□□□□ -2.19
SMC4-218ENST00000486711 C1QBP02746 253 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 UBE2BP63146 152 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 RPL19P84098 196 aaKnown RBP1.38□□□□□ -2.19
SMC4-218ENST00000486711 DEFB113Q30KQ7 82 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 AKR1C8PQ5T2L2 129 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 SOSTDC1Q6X4U4 206 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 TMED4Q7Z7H5 227 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 CLECL1Q8IZS7 167 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 OR2T35Q8NGX2 323 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 CDC26Q8NHZ8 85 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 ZNF418Q8TF45 676 aaPredicted RBP1.38□□□□□ -2.19
SMC4-218ENST00000486711 CANT1Q8WVQ1 401 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 TMEM126AQ9H061 195 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 HEATR5BQ9P2D3 2071 aa1.38□□□□□ -2.19
SMC4-218ENST00000486711 INTS1Q8N201 2190 aaKnown RBP1.37□□□□□ -2.19
SMC4-218ENST00000486711 LOC110117498A0A087WWA1 95 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 CCDC160A6NGH7 325 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 A8MWV9 139 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 SCGB2B2Q4G0G5 96 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 TEX261Q6UWH6 196 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 Q8N814 137 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 GPER1Q99527 375 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 SLC25A21Q9BQT8 299 aaPredicted RBP1.37□□□□□ -2.19
SMC4-218ENST00000486711 U3KQ87 197 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 MIA2Q96PC5 1412 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 RP1P56715 2156 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 RIMBP3CA6NJZ7 1639 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 RIMBP3BA6NNM3 1639 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 RIMBP3Q9UFD9 1639 aa1.37□□□□□ -2.19
SMC4-218ENST00000486711 H7C1C5 153 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 DHFRP00374 187 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 PHBP35232 272 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 LCN6P62502 163 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 EIF5AL1Q6IS14 154 aaKnown RBP1.36□□□□□ -2.19
SMC4-218ENST00000486711 FAM19A2Q8N3H0 131 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 OR13C6PQ8NH95 151 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 AP3S1Q92572 193 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 TMEM70Q9BUB7 260 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 CCDC94Q9BW85 323 aaPredicted RBP1.36□□□□□ -2.19
SMC4-218ENST00000486711 PRNDQ9UKY0 176 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 SSR3Q9UNL2 185 aa1.36□□□□□ -2.19
SMC4-218ENST00000486711 PLXND1Q9Y4D7 1925 aa1.35□□□□□ -2.19
SMC4-218ENST00000486711 DUXBA0A1W2PPF3 345 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms