RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 H3BMG7 143 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 H3BRM9 83 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 FFAR1O14842 300 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 SOCS1O15524 211 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 SSSCA1O60232 199 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 TRBV12-3P01733 135 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 SHBGP04278 402 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 ZNF705DP0CH99 300 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 ZNF705BP0CI00 300 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 IGKV1-13P0DP09 117 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 CD70P32970 193 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 NMUP48645 174 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 POLR2JP52435 117 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 LSM3P62310 102 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 MRPS36P82909 103 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 MLF2Q15773 248 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 FAM182AQ5T1J6 154 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 TMEM236Q5W0B7 351 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 SAXO1Q8IYX7 474 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 ZIC4Q8N9L1 334 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 OR10P1Q8NGE3 313 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 OR1J4Q8NGS1 313 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 VSTM2AQ8TAG5 236 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 GEMIN6Q8WXD5 167 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 ZNF689Q96CS4 500 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 RNF185Q96GF1 192 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 CCL13Q99616 98 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 PMCHL2Q9BQD1 86 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 AGPAT4-IT1Q9H0P7 198 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 C11orf68Q9H3H3 251 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 RPS10P5Q9NQ39 176 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 MOB4Q9Y3A3 225 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 DISP1Q96F81 1524 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 PLXNC1O60486 1568 aa3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 CEP170BQ9Y4F5 1589 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-217ENST00000486532 LRRC9Q6ZRR7 1453 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PRXQ9BXM0 1461 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ITSN1Q15811 1721 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 CDC42BPBQ9Y5S2 1711 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 IQGAP3Q86VI3 1631 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 STRCP1A6NGW2 1772 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 LAMB1P07942 1786 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 IGHV3OR16-13A0A075B7E8 117 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 IGHV1-69DA0A0B4J2H0 117 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 A0A0J9YXV3 536 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ZNF727A8MUV8 499 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 EPM2AB3EWF7 344 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 YPEL1O60688 119 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PROSCO94903 275 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 NDUFB6O95139 128 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 NGFP01138 241 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 IGHV3-9P01782 118 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 HLA-DQB1P01920 261 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 RBP4P02753 201 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 HLA-DRB4P13762 266 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 NFYAP23511 347 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 GATA2P23769 480 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 NCBP2P52298 156 aaKnown RBP eCLIP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 BRWD1-AS2P59051 145 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 YPEL3P61236 119 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PMCHL1Q16048 86 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 CLLU1OSQ5K130 101 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 MUC21Q5SSG8 566 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ZC2HC1BQ5TFG8 222 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 GFRALQ6UXV0 394 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 SLC25A42Q86VD7 318 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 RNF182Q8N6D2 247 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 TMEM75Q8N9X5 138 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PRSS33Q8NF86 280 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 CNRIP1Q96F85 164 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 S100A16Q96FQ6 103 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ABHD14BQ96IU4 210 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 LITAFQ99732 161 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PYGO2Q9BRQ0 406 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 RHNO1Q9BSD3 238 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 SIX2Q9NPC8 291 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 SLC39A9Q9NUM3 307 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 C21orf62Q9NYP8 219 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 SERP1Q9Y6X1 66 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 HLA-DRB4X5D2U9 266 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 POLR1AO95602 1720 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 RICTORQ6R327 1708 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 SHANK3Q9BYB0 1731 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PLXNA4Q9HCM2 1894 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 PXDNQ92626 1479 aa3.16□□□□□ -1.9
R3HDM1-217ENST00000486532 ABCA6Q8N139 1617 aa3.15□□□□□ -1.9
R3HDM1-217ENST00000486532 PTPN23Q9H3S7 1636 aa3.15□□□□□ -1.9
R3HDM1-217ENST00000486532 TRBV20-1A0A075B6N2 111 aa3.15□□□□□ -1.91
R3HDM1-217ENST00000486532 A0A1B0GW54 56 aa3.15□□□□□ -1.91
R3HDM1-217ENST00000486532 KLLNB2CW77 178 aa3.15□□□□□ -1.91
R3HDM1-217ENST00000486532 IGLL5B9A064 214 aa3.15□□□□□ -1.91
R3HDM1-217ENST00000486532 MCRIP1C9JLW8 97 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms