RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 LEMD1Q68G75 181 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 LYG2Q86SG7 212 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 OR51G1Q8NGK1 321 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
CHMP3-208ENST00000486404 SDHCQ99643 169 aaPredicted RBP9.53□□□□□ -0.88
CHMP3-208ENST00000486404 MPTX1A8MV57 137 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 H3BP45 60 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 ADAP1O75689 374 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 CA1P00915 261 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-208ENST00000486404 ZNF688P0C7X2 276 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 PSG1P11464 419 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 BTCP35070 178 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 AP2S1P53680 142 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-208ENST00000486404 LYZP61626 148 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 AKR1C1Q04828 323 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 GAMTQ14353 236 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 CNPY1Q3B7I2 92 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 SPANXN5Q5MJ07 72 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 STHQ8IWL8 128 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 PPP1R14BQ96C90 147 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 C20orf85Q9H1P6 137 aa9.52□□□□□ -0.89
CHMP3-208ENST00000486404 STRAPQ9Y3F4 350 aaKnown RBP9.52□□□□□ -0.89
CHMP3-208ENST00000486404 K7EQG2 157 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 LYRM1O43325 122 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 SSSCA1O60232 199 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-208ENST00000486404 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 OR8G2PQ6IF36 304 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 SIGLEC15Q6ZMC9 328 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 FAM24BQ8N5W8 94 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 TMEM217Q8N7C4 229 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 GLMPQ8WWB7 406 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 RNF183Q96D59 192 aa9.51□□□□□ -0.89
CHMP3-208ENST00000486404 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
CHMP3-208ENST00000486404 ZNF90Q03938 601 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 OR2F1Q13607 317 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 GATAD1Q8WUU5 269 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 CCDC32Q9BV29 185 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 U3KQE9 123 aa9.5□□□□□ -0.89
CHMP3-208ENST00000486404 CXorf65A6NEN9 183 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 JTBO76095 146 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 PMS2P11Q13670 270 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 ZNF846Q147U1 533 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 IAH1Q2TAA2 248 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-208ENST00000486404 ACOT7LQ6ZUV0 252 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 TRGV9Q99603 122 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 PSENENQ9NZ42 101 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 AGRNO00468 2067 aa9.49□□□□□ -0.89
CHMP3-208ENST00000486404 TENM2Q9NT68 2774 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 SNRPGP15A8MWD9 76 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 BUB3O43684 328 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 POLR2GP62487 172 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHMP3-208ENST00000486404 ACTL10Q5JWF8 245 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 OR4D5Q8NGN0 318 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 S100ZQ8WXG8 99 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 NUDT15Q9NV35 164 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 FBXL17Q9UF56 701 aa9.48□□□□□ -0.89
CHMP3-208ENST00000486404 TRAV6A0A075B6T7 132 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 LCE6AA0A183 80 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 FAM25EA8MYX2 175 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 CFDP00746 253 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-208ENST00000486404 S100A7P31151 101 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 BPIFCQ8NFQ6 507 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 MITD1Q8WV92 249 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 RARRES2Q99969 163 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 STARD9Q9P2P6 4700 aa9.47□□□□□ -0.89
CHMP3-208ENST00000486404 NUPR2A6NF83 97 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 PRSS46E5RG02 174 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 PLA2G10O15496 165 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 TCRBP04435 133 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 SPP1P10451 314 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 ID3Q02535 119 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 TMEM41BQ5BJD5 291 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-208ENST00000486404 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
CHMP3-208ENST00000486404 OR8I2Q8N0Y5 310 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 ZBTB8BQ8NAP8 495 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-208ENST00000486404 OR11H2Q8NH07 326 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 RAB40CQ96S21 281 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 MGAT4CQ9UBM8 478 aa9.46□□□□□ -0.9
CHMP3-208ENST00000486404 IGKV1OR2-108A0A075B7D4 117 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 FAM240BA0A1B0GVZ2 78 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 L7N2F9 121 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 CCSO14618 274 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 ID1P41134 155 aa9.45□□□□□ -0.9
CHMP3-208ENST00000486404 RRAS2P62070 204 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms