RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 LINC01619G3V211 115 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 ATP6V0CP27449 155 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 RELQ04864 619 aaPredicted RBP12.69□□□□□ -0.38
THBS3-207ENST00000486260 ZNF616Q08AN1 781 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 ZNF709Q8N972 641 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 SH3BGRL3Q9H299 93 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
THBS3-207ENST00000486260 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
THBS3-207ENST00000486260 IGHV3OR16-8A0A075B7F1 116 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 CCL24O00175 119 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 FABP1P07148 127 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
THBS3-207ENST00000486260 SLURP1P55000 103 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 SLC51BQ86UW2 128 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 Q8WTZ3 238 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
THBS3-207ENST00000486260 C17orf112F2Z3M2 114 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 YIF1AO95070 293 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 LINC00869P0C866 280 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 RPL29P47914 159 aaKnown RBP12.67□□□□□ -0.38
THBS3-207ENST00000486260 SELENOTP62341 195 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 TOMM20LQ6UXN7 152 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 STPG3Q8N7X2 389 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 STOML3Q8TAV4 291 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 RCC1LQ96I51 464 aaKnown RBP12.67□□□□□ -0.38
THBS3-207ENST00000486260 PXMP4Q9Y6I8 212 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
THBS3-207ENST00000486260 TPT1P13693 172 aaKnown RBP12.66□□□□□ -0.38
THBS3-207ENST00000486260 ZP3P21754 424 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 PRR20EP86478 221 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 PRR20CP86479 221 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 PRR20DP86480 221 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 PRR20BP86481 221 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 PRR20AP86496 221 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 OR51G1Q8NGK1 321 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 SLC25A32Q9H2D1 315 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 NDUFA4O00483 81 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 IL4P05112 153 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 B2MP61769 119 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 EIF5AP63241 154 aaKnown RBP12.66□□□□□ -0.38
THBS3-207ENST00000486260 FHL3Q13643 280 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
THBS3-207ENST00000486260 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 TIMM9Q9Y5J7 89 aa12.66□□□□□ -0.38
THBS3-207ENST00000486260 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 SYNJ2BPP57105 145 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 LYZP61626 148 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 KLF5Q13887 457 aaPredicted RBP12.65□□□□□ -0.38
THBS3-207ENST00000486260 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 PSMG3Q9BT73 122 aaPredicted RBP12.65□□□□□ -0.38
THBS3-207ENST00000486260 C20orf24Q9BUV8 137 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
THBS3-207ENST00000486260 WI2-2373I1.2A0A1W2PRP0 233 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 TSPAN15O95858 294 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 SPP1P10451 314 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 ORM2P19652 201 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 ELLP55199 621 aaPredicted RBP12.64□□□□□ -0.39
THBS3-207ENST00000486260 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 OR2G3Q8NGZ4 309 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 DLX4Q92988 240 aaPredicted RBP12.64□□□□□ -0.39
THBS3-207ENST00000486260 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 DOK5Q9P104 306 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 ZNF207O43670 478 aaKnown RBP12.64□□□□□ -0.39
THBS3-207ENST00000486260 CFDP00746 253 aaPredicted RBP12.64□□□□□ -0.39
THBS3-207ENST00000486260 MYCNOSP40205 109 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 USF2Q15853 346 aaPredicted RBP12.64□□□□□ -0.39
THBS3-207ENST00000486260 Q6ZRG5 221 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 OR1B1Q8NGR6 318 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 TMEM190Q8WZ59 177 aa12.64□□□□□ -0.39
THBS3-207ENST00000486260 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 ZNF767PQ75MW2 155 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 C1QL4Q86Z23 238 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 OR4F17Q8NGA8 305 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 OR4F4Q96R69 305 aa12.63□□□□□ -0.39
THBS3-207ENST00000486260 VWFP04275 2813 aa12.62□□□□□ -0.39
THBS3-207ENST00000486260 PLP1P60201 277 aa12.62□□□□□ -0.39
THBS3-207ENST00000486260 SERF2P84101 59 aa12.62□□□□□ -0.39
THBS3-207ENST00000486260 PATE2Q6UY27 113 aa12.62□□□□□ -0.39
THBS3-207ENST00000486260 LGALS9O00182 355 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 HYPMO75409 117 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 PF4P02776 101 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 OR5G3P0C626 314 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 M6PRP20645 277 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 TM4SF20Q53R12 229 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 TMEM37Q8WXS4 190 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 VSIRQ9H7M9 311 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
THBS3-207ENST00000486260 COX7A2P2O60397 106 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms