RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 NPY1RP25929 384 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
CUX1-208ENST00000485792 EWSR1Q01844 656 aaKnown RBP eCLIP4.24□□□□□ -1.73
CUX1-208ENST00000485792 GAMTQ14353 236 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 HAGHQ16775 308 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 ODF3L2Q3SX64 289 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 BTNL8Q6UX41 500 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 TMEM14EPQ6UXP3 125 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 TMED4Q7Z7H5 227 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 NOXA1Q86UR1 476 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 THAP8Q8NA92 274 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 OR1S2Q8NGQ3 325 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 SMIM8Q96KF7 97 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 RNF2Q99496 336 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 ASCL2Q99929 193 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 SPAG8Q99932 426 aaPredicted RBP4.24□□□□□ -1.73
CUX1-208ENST00000485792 NEURL2Q9BR09 285 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 PDCD10Q9BUL8 212 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 C20orf85Q9H1P6 137 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 HIPK2Q9H2X6 1198 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 HEYLQ9NQ87 328 aaPredicted RBP4.24□□□□□ -1.73
CUX1-208ENST00000485792 PUS1Q9Y606 427 aaKnown RBP eCLIP4.24□□□□□ -1.73
CUX1-208ENST00000485792 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
CUX1-208ENST00000485792 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 TRAV14DV4A0A0A6YYC5 116 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 RPS10-NUDT3A0A1W2PQS6 291 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 CEBPZOSA8MTT3 80 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 K7EPK0 472 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 ZNF207O43670 478 aaKnown RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 MED6O75586 246 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 TOMM40O96008 361 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 OPRK1P41145 380 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 RND2P52198 227 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 TAS2R30P59541 319 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 ZNF846Q147U1 533 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 Q56UQ5 140 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 CT83Q5H943 113 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 ETFRF1Q6IPR1 90 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 ZNF431Q8TF32 576 aaPredicted RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 DCANP1Q8TF63 244 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 ST8SIA2Q92186 375 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 PINX1Q96BK5 328 aaKnown RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 CIB3Q96Q77 187 aaPredicted RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 MARVELD1Q9BSK0 173 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 RHPN1-AS1Q9BWJ2 59 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 WDR12Q9GZL7 423 aaKnown RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 ENY2Q9NPA8 101 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 NUDT15Q9NV35 164 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 RCL1Q9Y2P8 373 aaKnown RBP4.23□□□□□ -1.73
CUX1-208ENST00000485792 U3KQK5 164 aa4.23□□□□□ -1.73
CUX1-208ENST00000485792 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 IGHV3-74A0A0B4J1X5 117 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 LINC00854A0A1B0GVQ3 168 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 OR11H12B2RN74 326 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 CCSO14618 274 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 BUB3O43684 328 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 MBPP02686 304 aaPredicted RBP4.22□□□□□ -1.73
CUX1-208ENST00000485792 HOXB5P09067 269 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 PSG1P11464 419 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 OR10J1P30954 320 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 CD81P60033 236 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 PLP1P60201 277 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 ARL16Q0P5N6 197 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 USF2Q15853 346 aaPredicted RBP4.22□□□□□ -1.73
CUX1-208ENST00000485792 TIGITQ495A1 244 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 LAMTOR1Q6IAA8 161 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 C16orf54Q6UWD8 224 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 SLC16A13Q7RTY0 426 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 GTSCR1Q86UQ5 136 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 DEFB125Q8N687 156 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 ZBTB8BQ8NAP8 495 aaPredicted RBP4.22□□□□□ -1.73
CUX1-208ENST00000485792 UBAC2Q8NBM4 344 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 OR1S1Q8NH92 325 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 COQ8AQ8NI60 647 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 RNASE11Q8TAA1 199 aaKnown RBP4.22□□□□□ -1.73
CUX1-208ENST00000485792 DYNLRB2Q8TF09 96 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 GLMPQ8WWB7 406 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 NPIPB3Q92617 1050 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 C20orf173Q96LM9 149 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 WWC2-AS2Q96NR7 200 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 TRGV9Q99603 122 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 SEC22CQ9BRL7 303 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 GINS3Q9BRX5 216 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 DNAH10Q8IVF4 4471 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
CUX1-208ENST00000485792 KIR2DL5BA0A0G2JN68 375 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 KIR2DL5BA0A0G2JPC4 375 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 FAM240BA0A1B0GVZ2 78 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 A0A1W2PS18 150 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 C7orf66A4D0T2 115 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 SNRPGP15A8MWD9 76 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 K7EQG2 157 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 TSC22D2O75157 780 aa4.21□□□□□ -1.74
CUX1-208ENST00000485792 DFFBO76075 338 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms