RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 Q56UQ5 140 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 ZNF678Q5SXM1 525 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C10orf91Q5T1B1 145 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 Q6AWC8 147 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C22orf39Q6P5X5 142 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C9orf47Q6ZRZ4 202 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 Q6ZUT4 128 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 SMIM5Q71RC9 77 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 MDP1Q86V88 176 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 MKXQ8IYA7 352 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 ATOH7Q8N100 152 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C3orf22Q8N5N4 141 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 ZNF491Q8N8L2 437 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 OR4X2Q8NGF9 303 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 NEUROG1Q92886 237 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 ELSPBP1Q96BH3 223 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 FAM218AQ96MZ4 157 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 PKMYT1Q99640 499 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 TM2D3Q9BRN9 247 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 AIG1Q9NVV5 245 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 CHCHD2Q9Y6H1 151 aaPredicted RBP3.44□□□□□ -1.86
RTN4-213ENST00000485749 IGHV3OR16-12A0A075B7B8 117 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 IGHV6-1A0A0B4J1U7 121 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 K7EP34 96 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 LGALS9O00182 355 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 COX7A2LO14548 114 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 SNCGO76070 127 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 TRACP01848 142 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 NMBP08949 121 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 LINC00869P0C866 280 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 GATA2P23769 480 aaPredicted RBP3.43□□□□□ -1.86
RTN4-213ENST00000485749 BTCP35070 178 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 CA7P43166 264 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 INSL3P51460 131 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
RTN4-213ENST00000485749 CLLU1OSQ5K130 101 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 C1orf100Q5SVJ3 147 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 C9orf57Q5W0N0 161 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 UNQ5815/PRO19632Q6UWF5 114 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 SHISA6Q6ZSJ9 500 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 AAED1Q7RTV5 226 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 TMEM183AQ8IXX5 376 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 DEFB106AQ8N104 65 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 ZNF843Q8N446 348 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 STAG3L4Q8TBR4 150 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 C2orf15Q8WU43 125 aaKnown RBP3.43□□□□□ -1.86
RTN4-213ENST00000485749 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 HIST1H2BLQ99880 126 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 GABARAPL1Q9H0R8 117 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 SLC25A22Q9H936 323 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 DNAJC15Q9Y5T4 150 aa3.43□□□□□ -1.86
RTN4-213ENST00000485749 SIPA1L1O43166 1804 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 COL1A2P08123 1366 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 TRAV12-2A0A075B6T6 113 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 TRGV8A0A0C4DH27 118 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 A0A0J9YW62 118 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 ODAMA1E959 279 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 M0R1X1 148 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 LST1O00453 97 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 HRASP01112 189 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 S100A4P26447 101 aaKnown RBP3.42□□□□□ -1.86
RTN4-213ENST00000485749 IL3RAP26951 378 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 SYNJ2BPP57105 145 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 QRFPP83859 136 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 DIAPH2-AS1Q14236 149 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 ADIRFQ15847 76 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 COA6Q5JTJ3 125 aaKnown RBP3.42□□□□□ -1.86
RTN4-213ENST00000485749 LINC01545Q5VT33 79 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 UFSP1Q6NVU6 142 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 RFLNAQ6ZTI6 216 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 ZNF584Q8IVC4 421 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 RNF182Q8N6D2 247 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 C11orf52Q96A22 123 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 LINC00526Q96FQ7 95 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 C18orf15Q96N68 181 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 TSSK6Q9BXA6 273 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 HEXA-AS1Q9H8Q6 139 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 CLCF1Q9UBD9 225 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 PHIPQ8WWQ0 1821 aa3.42□□□□□ -1.86
RTN4-213ENST00000485749 LY75O60449 1722 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 TRAV9-2A0A087WT02 112 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 TRAV41A0A0B4J266 112 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 FAM24AA6NFZ4 105 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 ZNF705FA8MVS1 300 aaPredicted RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 KLLNB2CW77 178 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 IGLL5B9A064 214 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 NDUFC2-KCTD14E9PQ53 114 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 F8W1H4 67 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 TMEM250H0YL14 139 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 CD5LO43866 347 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 WISP3O95389 354 aaPredicted RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 GYPAP02724 150 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 ZNF705BP0CI00 300 aaPredicted RBP3.41□□□□□ -1.86
RTN4-213ENST00000485749 IGLL1P15814 213 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 ELK1P19419 428 aa3.41□□□□□ -1.86
RTN4-213ENST00000485749 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms