RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 ACY3Q96HD9 319 aa8.66□□□□□ -1.02
SSR4-210ENST00000485612 MIXL1Q9H2W2 232 aa8.66□□□□□ -1.02
SSR4-210ENST00000485612 NAA60Q9H7X0 242 aa8.66□□□□□ -1.02
SSR4-210ENST00000485612 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
SSR4-210ENST00000485612 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SSR4-210ENST00000485612 TEX13DA0A0J9YY54 714 aaPredicted RBP8.65□□□□□ -1.02
SSR4-210ENST00000485612 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 BUB3O43684 328 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 SCGB2A1O75556 95 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 IGKV3-20P01619 116 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 TBPP20226 339 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 EIF2B2P49770 351 aaKnown RBP8.65□□□□□ -1.02
SSR4-210ENST00000485612 TAS2R19P59542 299 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 CTF1Q16619 201 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 TMEM268Q5VZI3 342 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 C6orf223Q8N319 242 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 OR52E5Q8NH55 327 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 NPIPB3Q92617 1050 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.02
SSR4-210ENST00000485612 NRN1Q9NPD7 142 aa8.65□□□□□ -1.02
SSR4-210ENST00000485612 TOMM40O96008 361 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 PSG1P11464 419 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 SLC25A4P12235 298 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 EMP1P54849 157 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 FAM219AQ8IW50 185 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 OR51G1Q8NGK1 321 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 RNASEH2CQ8TDP1 164 aaKnown RBP8.64□□□□□ -1.03
SSR4-210ENST00000485612 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
SSR4-210ENST00000485612 C14orf166Q9Y224 244 aaKnown RBP8.64□□□□□ -1.03
SSR4-210ENST00000485612 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
SSR4-210ENST00000485612 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 CRYM-AS1A6NIL9 109 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 GABARAPO95166 117 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 ZNF182P17025 639 aaPredicted RBP8.63□□□□□ -1.03
SSR4-210ENST00000485612 AP2S1P53680 142 aaPredicted RBP8.63□□□□□ -1.03
SSR4-210ENST00000485612 SNRPD3P62318 126 aaKnown RBP8.63□□□□□ -1.03
SSR4-210ENST00000485612 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 GPR107Q5VW38 600 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
SSR4-210ENST00000485612 OR4C16Q8NGL9 310 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
SSR4-210ENST00000485612 ZNF705FA8MVS1 300 aaPredicted RBP8.62□□□□□ -1.03
SSR4-210ENST00000485612 GABARAPH6UMI1 98 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 ZNF705DP0CH99 300 aaPredicted RBP8.62□□□□□ -1.03
SSR4-210ENST00000485612 ZNF705BP0CI00 300 aaPredicted RBP8.62□□□□□ -1.03
SSR4-210ENST00000485612 RD3LP0DJH9 198 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 SMIM18P0DKX4 95 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 Q5VSD8 79 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 AP3S1Q92572 193 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 RNF125Q96EQ8 232 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 PBDC1Q9BVG4 233 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 GPR132Q9UNW8 380 aa8.62□□□□□ -1.03
SSR4-210ENST00000485612 IGKV1D-37A0A075B6S9 117 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 F6UB75 175 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 J3QL48 77 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 CTDSP2O14595 271 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 SULT1A3P0DMM9 295 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 SULT1A4P0DMN0 295 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 NKX2-1P43699 371 aaPredicted RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 FAM3BP58499 235 aaPredicted RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 NUTF2P61970 127 aaKnown RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 ZNF90Q03938 601 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 ZNF709Q8N972 641 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 FRZBQ92765 325 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 NEU1Q99519 415 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 RBKSQ9H477 322 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 SAV1Q9H4B6 383 aaPredicted RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
SSR4-210ENST00000485612 TMED3Q9Y3Q3 217 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 TMEM56-RWDD3S4R434 201 aa8.61□□□□□ -1.03
SSR4-210ENST00000485612 DISC1C4P0D8 188 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 SOCS3O14543 225 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 ETFRF1Q6IPR1 90 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 OR51S1Q8NGJ8 323 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 LINC00052Q96N35 136 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 DKK2Q9UBU2 259 aa8.6□□□□□ -1.03
SSR4-210ENST00000485612 RGS5O15539 181 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 SPART-AS1P0CW21 52 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 AKAIN1P0CW23 69 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 HTN3P15516 51 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 LYZP61626 148 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 SUPT4H1P63272 117 aaKnown RBP8.59□□□□□ -1.03
SSR4-210ENST00000485612 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
SSR4-210ENST00000485612 GAMTQ14353 236 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 SPCS2Q15005 226 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 SURF2Q15527 256 aaPredicted RBP8.59□□□□□ -1.03
SSR4-210ENST00000485612 LYZL2Q7Z4W2 148 aa8.59□□□□□ -1.03
SSR4-210ENST00000485612 LGI3Q8N145 548 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms