RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 IGHV3-21A0A0B4J1V1 117 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 RNF222A6NCQ9 220 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 GNG7O60262 68 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 CLEC3BP05452 202 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 RND2P52198 227 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 MLANAQ16655 118 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 Q56UQ5 140 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 RCHY1Q96PM5 261 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
TRIM54-203ENST00000485306 A0A0D9SG52 128 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 ZNF320A2RRD8 509 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 TAAR5O14804 337 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 NUPL2O15504 423 aaKnown RBP12.56□□□□□ -0.4
TRIM54-203ENST00000485306 TGOLN2O43493 480 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
TRIM54-203ENST00000485306 AKR1C1Q04828 323 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 THAP8Q8NA92 274 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 NPIPB3Q92617 1050 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 ACY3Q96HD9 319 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
TRIM54-203ENST00000485306 TECRQ9NZ01 308 aaKnown RBP12.56□□□□□ -0.4
TRIM54-203ENST00000485306 SMCO3A2RU48 225 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 C2orf70A6NJV1 201 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 F8W735 103 aaPredicted RBP12.55□□□□□ -0.4
TRIM54-203ENST00000485306 FABP1P07148 127 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 FOLR2P14207 255 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 CD300CQ08708 224 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 ZNF266Q14584 549 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
TRIM54-203ENST00000485306 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 ATP5SQ99766 215 aa12.55□□□□□ -0.4
TRIM54-203ENST00000485306 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
TRIM54-203ENST00000485306 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 C3orf84H3BNL1 204 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 MPDU1O75352 247 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 IFNA5P01569 189 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 OR10J1P30954 320 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 GPR183P32249 361 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 RAB31Q13636 194 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 CLINT1Q14677 625 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 DEFB114Q30KQ6 69 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 PPP1R14BQ96C90 147 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 TRGV9Q99603 122 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
TRIM54-203ENST00000485306 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
TRIM54-203ENST00000485306 OR2T8A6NH00 312 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 CTSGP08311 255 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 CBLN1P23435 193 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 YPEL3P61236 119 aaPredicted RBP12.53□□□□□ -0.4
TRIM54-203ENST00000485306 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
TRIM54-203ENST00000485306 ADAMTSL5Q6ZMM2 481 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 STAB2Q8WWQ8 2551 aa12.53□□□□□ -0.4
TRIM54-203ENST00000485306 ZNF785A8K8V0 405 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 CFDP00746 253 aaPredicted RBP12.52□□□□□ -0.41
TRIM54-203ENST00000485306 EDN2P20800 178 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 C4BPBP20851 252 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
TRIM54-203ENST00000485306 CD81P60033 236 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 GUCA2BQ16661 112 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
TRIM54-203ENST00000485306 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 UBE2L5PA0A1B0GUS4 154 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 KANTRA0A1W2PQU2 76 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 A8MWP6 167 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 IGKV1-17P01599 117 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 CXCL2P19875 107 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 ADMP35318 185 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 SELENOTP62341 195 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
TRIM54-203ENST00000485306 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
TRIM54-203ENST00000485306 IGKV1D-37A0A075B6S9 117 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 NDUFA4O00483 81 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 BCL2L11O43521 198 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 JTBO76095 146 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 ELLP55199 621 aaPredicted RBP12.5□□□□□ -0.41
TRIM54-203ENST00000485306 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
TRIM54-203ENST00000485306 HAGHQ16775 308 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 TIGITQ495A1 244 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 UNQ9165/PRO28630Q6UXU0 137 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 Q8WTZ3 238 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 CHRDL1Q9BU40 450 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 ARL6Q9H0F7 186 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms