RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 PBDC1Q9BVG4 233 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 GPN1Q9HCN4 374 aaPredicted RBP14.28□□□□□ -0.12
SNX17-206ENST00000484886 SMCO3A2RU48 225 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 ZNF90Q03938 601 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 USF2Q15853 346 aaPredicted RBP14.27□□□□□ -0.13
SNX17-206ENST00000484886 FAM90A2PQ658T7 463 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 NRARPQ7Z6K4 114 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 RAB40CQ96S21 281 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 RABAC1Q9UI14 185 aa14.27□□□□□ -0.13
SNX17-206ENST00000484886 L7N2F9 121 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 MBPP02686 304 aaPredicted RBP14.26□□□□□ -0.13
SNX17-206ENST00000484886 IL5P05113 134 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 EIF2B2P49770 351 aaKnown RBP14.26□□□□□ -0.13
SNX17-206ENST00000484886 LYZP61626 148 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 VAMP2P63027 116 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 OR2F1Q13607 317 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 ODF3L2Q3SX64 289 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 GSG1LQ6UXU4 331 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 ACOT7LQ6ZUV0 252 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 STXBP6Q8NFX7 210 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 RNF125Q96EQ8 232 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 MS4A6AQ9H2W1 248 aa14.26□□□□□ -0.13
SNX17-206ENST00000484886 RCL1Q9Y2P8 373 aaKnown RBP14.26□□□□□ -0.13
SNX17-206ENST00000484886 LSM5Q9Y4Y9 91 aaKnown RBP14.26□□□□□ -0.13
SNX17-206ENST00000484886 IGKV1D-37A0A075B6S9 117 aa14.25□□□□□ -0.13
SNX17-206ENST00000484886 LOC102724200A0A096LPH7 203 aaPredicted RBP14.25□□□□□ -0.13
SNX17-206ENST00000484886 TRGV9Q99603 122 aa14.25□□□□□ -0.13
SNX17-206ENST00000484886 GGTLC1Q9BX51 225 aa14.25□□□□□ -0.13
SNX17-206ENST00000484886 PRSS46E5RG02 174 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 INMT-MINDY4F8WBC2 141 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 METTL15P1P0C7V9 234 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 CMC4P56277 68 aaPredicted RBP14.24□□□□□ -0.13
SNX17-206ENST00000484886 S100A10P60903 97 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 LINC00322Q6ZN03 302 aaPredicted RBP14.24□□□□□ -0.13
SNX17-206ENST00000484886 APRG1Q8IVJ8 170 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 PPP1R14BQ96C90 147 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 C2orf50Q96LR7 162 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 CITED4Q96RK1 184 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 RETNQ9HD89 108 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 PFDN2Q9UHV9 154 aa14.24□□□□□ -0.13
SNX17-206ENST00000484886 HELTA6NFD8 242 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 SNRPGP15A8MWD9 76 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 BCAP31P51572 246 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 PAX9P55771 341 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 TAS2R30P59541 319 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 RRAS2P62070 204 aaPredicted RBP14.23□□□□□ -0.13
SNX17-206ENST00000484886 THAP8Q8NA92 274 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 U3KQE9 123 aa14.23□□□□□ -0.13
SNX17-206ENST00000484886 PRAF2O60831 178 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 TSC22D2O75157 780 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 CCNKO75909 580 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 NUP62P37198 522 aaPredicted RBP14.22□□□□□ -0.13
SNX17-206ENST00000484886 C16orf54Q6UWD8 224 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 TMEM14EPQ6UXP3 125 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 OR10P1Q8NGE3 313 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 FAM110AQ9BQ89 295 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 MAP6D1Q9H9H5 199 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 MGAT4CQ9UBM8 478 aa14.22□□□□□ -0.13
SNX17-206ENST00000484886 IGKV1OR2-108A0A075B7D4 117 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 TRAV2A0A0B4J234 112 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 C7orf66A4D0T2 115 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 K7EPK0 472 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 RPL35AP18077 110 aaKnown RBP14.21□□□□□ -0.13
SNX17-206ENST00000484886 PVALBP20472 110 aaPredicted RBP14.21□□□□□ -0.13
SNX17-206ENST00000484886 CAV2P51636 162 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 GLMPQ8WWB7 406 aa14.21□□□□□ -0.13
SNX17-206ENST00000484886 GOSR2O14653 212 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 AP2S1P53680 142 aaPredicted RBP14.2□□□□□ -0.14
SNX17-206ENST00000484886 APOC4P55056 127 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 DLK1P80370 383 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 ZNF124Q15973 351 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 SIGLEC15Q6ZMC9 328 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 TMEM144Q7Z5S9 345 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 BPIFCQ8NFQ6 507 aa14.2□□□□□ -0.14
SNX17-206ENST00000484886 PMS2P5A8MQ11 134 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 BUB3O43684 328 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 CFDP00746 253 aaPredicted RBP14.19□□□□□ -0.14
SNX17-206ENST00000484886 DEFB131AP59861 70 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 LEMD1Q68G75 181 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 FAM24BQ8N5W8 94 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 HUWE1Q7Z6Z7 4374 aaKnown RBP14.19□□□□□ -0.14
SNX17-206ENST00000484886 STAB2Q8WWQ8 2551 aa14.19□□□□□ -0.14
SNX17-206ENST00000484886 K7EQG2 157 aa14.18□□□□□ -0.14
SNX17-206ENST00000484886 SIX6O95475 246 aa14.18□□□□□ -0.14
SNX17-206ENST00000484886 GATA2P23769 480 aaPredicted RBP14.18□□□□□ -0.14
SNX17-206ENST00000484886 RAB32Q13637 225 aa14.18□□□□□ -0.14
SNX17-206ENST00000484886 MARVELD1Q9BSK0 173 aa14.18□□□□□ -0.14
SNX17-206ENST00000484886 TENM3Q9P273 2699 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 SSNA1O43805 119 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 ZNF688P0C7X2 276 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 ORM2P19652 201 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 CYP2G1PQ6ZSU1 146 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 STPG3Q8N7X2 389 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 OR1B1Q8NGR6 318 aa14.17□□□□□ -0.14
SNX17-206ENST00000484886 SLC38A11Q08AI6 406 aa14.16□□□□□ -0.14
SNX17-206ENST00000484886 DCANP1Q8TF63 244 aa14.16□□□□□ -0.14
SNX17-206ENST00000484886 TMEM147Q9BVK8 224 aa14.16□□□□□ -0.14
SNX17-206ENST00000484886 NPVFQ9HCQ7 196 aa14.16□□□□□ -0.14
SNX17-206ENST00000484886 NRN1Q9NPD7 142 aa14.16□□□□□ -0.14
SNX17-206ENST00000484886 FBXL17Q9UF56 701 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms