RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 FAM90A26D6RGX4 464 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 HLA-DMBP28068 263 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 PSMG4Q5JS54 123 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 OR8G2PQ6IF36 304 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 SOSTQ9BQB4 213 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 AGRNO00468 2067 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-206ENST00000484733 NKX2-1P43699 371 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-206ENST00000484733 NUTF2P61970 127 aaKnown RBP8.28□□□□□ -1.08
SCFD1-206ENST00000484733 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 SIGLEC15Q6ZMC9 328 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 RAB2BQ8WUD1 216 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 RNF126Q9BV68 326 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 H3BMM0 161 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 IFNA10P01566 189 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 PSG1P11464 419 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 TMBIM6P55061 237 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 SRPXP78539 464 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 LGI3Q8N145 548 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 CENPSQ8N2Z9 138 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 OR51G1Q8NGK1 321 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 ACY3Q96HD9 319 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 NEU1Q99519 415 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 RBKSQ9H477 322 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
SCFD1-206ENST00000484733 SUPT4H1P63272 117 aaKnown RBP8.26□□□□□ -1.09
SCFD1-206ENST00000484733 Q6ZTC4 211 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 CLEC5AQ9NY25 188 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 DUXBA0A1W2PPF3 345 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 ANXA3P12429 323 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 KLF9Q13886 244 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-206ENST00000484733 LYZL2Q7Z4W2 148 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
SCFD1-206ENST00000484733 C1orf194Q5T5A4 169 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 IGHV4-4A0A075B6R2 117 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 IGKV1D-37A0A075B6S9 117 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 PITX3O75364 302 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 AMBPP02760 352 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 FABP1P07148 127 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 SLC25A6P12236 298 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 GAMTQ14353 236 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 C12orf74Q32Q52 190 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
SCFD1-206ENST00000484733 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 AKR1C4P17516 323 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 SPATA31B1PQ5VZV4 182 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF705AQ6ZN79 300 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-206ENST00000484733 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 SLIRPQ9GZT3 109 aaKnown RBP8.24□□□□□ -1.09
SCFD1-206ENST00000484733 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 TMEM189A5PLL7 270 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 TNFSF8P32971 234 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 ID1P41134 155 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 PSMB3P49720 205 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 LRTM2Q8N967 370 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 OR1S1Q8NH92 325 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 TRGV9Q99603 122 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 SAV1Q9H4B6 383 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-206ENST00000484733 XCL2Q9UBD3 114 aa8.24□□□□□ -1.09
SCFD1-206ENST00000484733 FABP12A6NFH5 140 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF705FA8MVS1 300 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-206ENST00000484733 SOCS3O14543 225 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF705DP0CH99 300 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF705BP0CI00 300 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-206ENST00000484733 FAUP35544 74 aaKnown RBP8.23□□□□□ -1.09
SCFD1-206ENST00000484733 FOXI2Q6ZQN5 318 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 MCUBQ9NWR8 336 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 CFDP00746 253 aaPredicted RBP8.23□□□□□ -1.09
SCFD1-206ENST00000484733 RAB11AP62491 216 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF90Q03938 601 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
SCFD1-206ENST00000484733 HERC2O95714 4834 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 ZNF79Q15937 498 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 TMEM128Q5BJH2 165 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 DEDD2Q8WXF8 326 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 PBDC1Q9BVG4 233 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 DNAH17Q9UFH2 4485 aa8.22□□□□□ -1.09
SCFD1-206ENST00000484733 SNRPGP15A8MWD9 76 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 MED6O75586 246 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 PAX9P55771 341 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 GDF5OSQ5U4N7 250 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 FAM210BQ96KR6 192 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.09
SCFD1-206ENST00000484733 RFNGQ9Y644 331 aa8.21□□□□□ -1.09
SCFD1-206ENST00000484733 TEX48A0A1B0GUV7 120 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 H3BMQ9 156 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 ISLRO14498 428 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms