RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 SMARCA2P51531 1590 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 HECW1Q76N89 1606 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 A6NN06 94 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 MT1FP04733 61 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 BAALC-AS2P0C853 105 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 COX6A1P12074 109 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 MT1HP80294 61 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 RHOGP84095 191 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 RSU1Q15404 277 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 SPRNQ5BIV9 151 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 C15orf41Q9Y2V0 281 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 AHCTF1Q8WYP5 2266 aa-0.2□□□□□ -2.44
CCDC66-219ENST00000484441 ZNF609O15014 1411 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 F5P12259 2224 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 ASXL1Q8IXJ9 1541 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 A0A0D9SG52 128 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 ACOX3O15254 700 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 LYZL6O75951 148 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 MT1AP04731 61 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 TYMSP04818 313 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 C8orf88P0DMB2 117 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 MT1GP13640 62 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 SSR2P43308 183 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 MARCKSL1P49006 195 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 DEFA1P59665 94 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 MPV17LQ2QL34 196 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 MT1MQ8N339 61 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 SFT2D1Q8WV19 159 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 PLEKHJ1Q9NW61 149 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 CASP8AP2Q9UKL3 1982 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 KDM5AP29375 1690 aaKnown RBP-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 DOCK3Q8IZD9 2030 aa-0.21□□□□□ -2.44
CCDC66-219ENST00000484441 RBBP6Q7Z6E9 1792 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 USF3Q68DE3 2245 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 TRAV12-1A0A0B4J245 112 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 TRAV1-1A0A0B4J248 108 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 A0A0D9SG42 100 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 LCE6AA0A183 80 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 M0R2T5 61 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 SSNA1O43805 119 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 UBL3O95164 117 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 IGKV1-5P01602 117 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 MT2AP02795 61 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 RPL12P30050 165 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 DEFA3P59666 94 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 DEFA5Q01523 94 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 C1orf137Q5JT78 98 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 SPANXN3Q5MJ09 141 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 Q5XG85 94 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 CHMP4BQ9H444 224 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 IMP3Q9NV31 184 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 TAS2R4Q9NYW5 299 aa-0.22□□□□□ -2.44
CCDC66-219ENST00000484441 RIC1Q4ADV7 1423 aa-0.22□□□□□ -2.45
CCDC66-219ENST00000484441 SMG6Q86US8 1419 aaKnown RBP-0.22□□□□□ -2.45
CCDC66-219ENST00000484441 CDK12Q9NYV4 1490 aaPredicted RBP-0.22□□□□□ -2.45
CCDC66-219ENST00000484441 TOPBP1Q92547 1522 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 LAMC1P11047 1609 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 COL4A6Q14031 1691 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 PPRC1Q5VV67 1664 aaKnown RBP-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 LAMB1P07942 1786 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 INMT-MINDY4F8WBC2 141 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 H0YAA0 97 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 MT1EP04732 61 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 OCMP0CE72 109 aaPredicted RBP-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 MT1XP80297 61 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 KRTAP19-2Q3LHN2 52 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 RPL22L1Q6P5R6 122 aaKnown RBP-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 OR4E2Q8NGC2 313 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 MCFD2Q8NI22 146 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 ULBP3Q9BZM4 244 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 WDR61Q9GZS3 305 aaKnown RBP-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 CDC42SE1Q9NRR8 79 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 RASL12Q9NYN1 266 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 MED14O60244 1454 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 CECR2Q9BXF3 1484 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 SLIT1O75093 1534 aa-0.23□□□□□ -2.45
CCDC66-219ENST00000484441 TET3O43151 1660 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 ERICH2A1L162 156 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BOP23527 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BBP33778 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BDP58876 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BCP62807 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 RHEBQ15382 184 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 GRK1Q15835 563 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST2H2BEQ16778 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 KLK9Q2XQG4 91 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 C1orf195Q5TG92 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 TMEM156Q8N614 296 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BHQ93079 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BNQ99877 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 HIST1H2BMQ99879 126 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 NABP2Q9BQ15 211 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 C7orf50Q9BRJ6 194 aaKnown RBP-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 FAM96AQ9H5X1 160 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 NIT2Q9NQR4 276 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 PHLPP1O60346 1717 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 LOC285556D6RIA3 1793 aa-0.24□□□□□ -2.45
CCDC66-219ENST00000484441 B4DSR2 109 aa-0.25□□□□□ -2.45
CCDC66-219ENST00000484441 LYNX1G3V0Z9 82 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms