RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SSMEM1Q8WWF3 244 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 RBM14Q96PK6 669 aaKnown RBP4.27□□□□□ -1.73
COL17A1-206ENST00000483876 TXN2Q99757 166 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 SEPSECSQ9HD40 501 aaKnown RBP4.27□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 TNFRSF19Q9NS68 423 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM242Q9NWH2 141 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 PRELID1Q9Y255 219 aa4.27□□□□□ -1.73
COL17A1-206ENST00000483876 HERC2O95714 4834 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 IGLV11-55A0A075B6I3 123 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 A0A087WWC5 75 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 IGHV7-81A0A0B4J1V7 117 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 A0A1B0GV50 99 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 C7orf77A4D0Y5 90 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 ZFP92A6NM28 416 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 H3BQ15 152 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 DNASE2O00115 360 aaPredicted RBP4.26□□□□□ -1.73
COL17A1-206ENST00000483876 SCO1O75880 301 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 C8orf88P0DMB2 117 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 EGR2P11161 476 aaPredicted RBP4.26□□□□□ -1.73
COL17A1-206ENST00000483876 DEFA4P12838 97 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 CD24P25063 80 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 GCHFRP30047 84 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 RND2P52198 227 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 CRIP2P52943 208 aaPredicted RBP4.26□□□□□ -1.73
COL17A1-206ENST00000483876 FGF8P55075 233 aaPredicted RBP4.26□□□□□ -1.73
COL17A1-206ENST00000483876 CD81P60033 236 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 GNB1P62873 340 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 GCSAMLQ5JQS6 135 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 FAM78BQ5VT40 261 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 C1QL4Q86Z23 238 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 PIFOQ8TCI5 191 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM37Q8WXS4 190 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 TVP23CQ96ET8 276 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 ACY3Q96HD9 319 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 FANCD2OSQ96PS1 177 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 SSX3Q99909 188 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 TCEAL7Q9BRU2 100 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 NIPSNAP3BQ9BS92 247 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 TMPRSS5Q9H3S3 457 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 SLC25A22Q9H936 323 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 SMCO4Q9NRQ5 59 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 HIF1ANQ9NWT6 349 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 GAR1Q9NY12 217 aaKnown RBP4.26□□□□□ -1.73
COL17A1-206ENST00000483876 DOK5Q9P104 306 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF580Q9UK33 172 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 PITPNC1Q9UKF7 332 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 DMRT1Q9Y5R6 373 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 CR1P17927 2039 aa4.26□□□□□ -1.73
COL17A1-206ENST00000483876 WNK2Q9Y3S1 2297 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 TRBV9A0A0B4J1U6 114 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 A0A1W2PRE2 83 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 C11orf94C9JXX5 98 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 K7EIM0 57 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 PAGE4O60829 102 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 HYPMO75409 117 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 SCGB2A1O75556 95 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 IGF1P05019 195 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 REG1AP05451 166 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 RD3LP0DJH9 198 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 ARL14EPLP0DKL9 152 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 S100A7P31151 101 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 MFAP4P55083 255 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM241Q24JQ0 296 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 ASPHD1Q5U4P2 390 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 PATE2Q6UY27 113 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 TEX29Q8N6K0 151 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 C5orf56Q8N8D9 126 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 C15orf54Q8N8G6 183 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 OR51G1Q8NGK1 321 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 FAM110DQ8TAY7 271 aaPredicted RBP4.25□□□□□ -1.73
COL17A1-206ENST00000483876 RPUSD4Q96CM3 377 aaKnown RBP4.25□□□□□ -1.73
COL17A1-206ENST00000483876 FAM167A-AS1Q96KT0 104 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 CTDSP1Q9GZU7 261 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 PRDM13Q9H4Q3 707 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 SDF2L1Q9HCN8 221 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 MRPL36Q9P0J6 103 aaKnown RBP4.25□□□□□ -1.73
COL17A1-206ENST00000483876 MRPL27Q9P0M9 148 aaKnown RBP4.25□□□□□ -1.73
COL17A1-206ENST00000483876 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 MOB4Q9Y3A3 225 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 LY96Q9Y6Y9 160 aa4.25□□□□□ -1.73
COL17A1-206ENST00000483876 A0A0U1RQK1 487 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 RBMY1BA6NDE4 496 aaKnown RBP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 A6NDX4 124 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 RBMY1EA6NEQ0 496 aaKnown RBP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF727A8MUV8 499 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 H3BUA1 57 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 M0R036 132 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms