RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 PITX3O75364 302 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 PSG1P11464 419 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 TCTAP57738 103 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 SNRPD3P62318 126 aaKnown RBP14.46□□□□□ -0.09
HPS4-213ENST00000483631 OR8G2PQ6IF36 304 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 OR1S1Q8NH92 325 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 NRN1Q9NPD7 142 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 V9GYH0 126 aa14.46□□□□□ -0.09
HPS4-213ENST00000483631 ZNF705EA8MWA4 302 aaPredicted RBP14.45□□□□□ -0.1
HPS4-213ENST00000483631 IFNA4P05014 189 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 FABP1P07148 127 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 MIFP14174 115 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 S100A5P33763 92 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 PYDC2Q56P42 97 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 SIGLEC15Q6ZMC9 328 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 Q8NAQ8 132 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 RNF125Q96EQ8 232 aa14.45□□□□□ -0.1
HPS4-213ENST00000483631 NANOS2P60321 138 aaKnown RBP14.44□□□□□ -0.1
HPS4-213ENST00000483631 ACTL10Q5JWF8 245 aa14.44□□□□□ -0.1
HPS4-213ENST00000483631 LGALS9CQ6DKI2 356 aa14.44□□□□□ -0.1
HPS4-213ENST00000483631 SLC35E1Q96K37 410 aa14.44□□□□□ -0.1
HPS4-213ENST00000483631 RAB40CQ96S21 281 aa14.44□□□□□ -0.1
HPS4-213ENST00000483631 TMED3Q9Y3Q3 217 aa14.44□□□□□ -0.1
HPS4-213ENST00000483631 KNCNA6PVL3 124 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 MED6O75586 246 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 NUTF2P61970 127 aaKnown RBP14.43□□□□□ -0.1
HPS4-213ENST00000483631 RAB11AP62491 216 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 GAMTQ14353 236 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 ZNF79Q15937 498 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 PSMG4Q5JS54 123 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 TMED4Q7Z7H5 227 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 CIB3Q96Q77 187 aaPredicted RBP14.43□□□□□ -0.1
HPS4-213ENST00000483631 C1QTNF4Q9BXJ3 329 aa14.43□□□□□ -0.1
HPS4-213ENST00000483631 ZFP92A6NM28 416 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 C11orf94C9JXX5 98 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 C4BPBP20851 252 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 C1orf194Q5T5A4 169 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 CCDC190Q86UF4 302 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 CSNK1G2-AS1Q8NCQ2 148 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 FBXL17Q9UF56 701 aa14.42□□□□□ -0.1
HPS4-213ENST00000483631 IGKV1D-37A0A075B6S9 117 aa14.41□□□□□ -0.1
HPS4-213ENST00000483631 ZNF701M0R085 212 aaPredicted RBP14.41□□□□□ -0.1
HPS4-213ENST00000483631 CFDP00746 253 aaPredicted RBP14.41□□□□□ -0.1
HPS4-213ENST00000483631 VAMP1P23763 118 aa14.41□□□□□ -0.1
HPS4-213ENST00000483631 UBE2MP61081 183 aaKnown RBP14.41□□□□□ -0.1
HPS4-213ENST00000483631 RPP30P78346 268 aaKnown RBP14.41□□□□□ -0.1
HPS4-213ENST00000483631 C2CD4CQ8TF44 421 aa14.41□□□□□ -0.1
HPS4-213ENST00000483631 TRGV9Q99603 122 aa14.41□□□□□ -0.1
HPS4-213ENST00000483631 SNRPGP15A8MWD9 76 aa14.4□□□□□ -0.1
HPS4-213ENST00000483631 SFT2D2O95562 160 aa14.4□□□□□ -0.1
HPS4-213ENST00000483631 NKX2-1P43699 371 aaPredicted RBP14.4□□□□□ -0.1
HPS4-213ENST00000483631 TBC1D24Q9ULP9 559 aa14.4□□□□□ -0.1
HPS4-213ENST00000483631 X6R8D5 127 aa14.4□□□□□ -0.1
HPS4-213ENST00000483631 IGHV4-28A0A0C4DH34 117 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 CCDC160A6NGH7 325 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 H3BMM0 161 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 HLA-DRB4P13762 266 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 SAMD13Q5VXD3 122 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 CENPSQ8N2Z9 138 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 THAP8Q8NA92 274 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 RBM38Q9H0Z9 239 aaKnown RBP14.39□□□□□ -0.11
HPS4-213ENST00000483631 HLA-DRB4X5D2U9 266 aa14.39□□□□□ -0.11
HPS4-213ENST00000483631 KMT2AQ03164 3969 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 DEFB4AO15263 64 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 RBMY1A1P0DJD3 496 aaKnown RBP14.38□□□□□ -0.11
HPS4-213ENST00000483631 RBMY1CP0DJD4 496 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 ZNF90Q03938 601 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 PPP1R1AQ13522 171 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 RBMY1FQ15415 496 aaKnown RBP14.38□□□□□ -0.11
HPS4-213ENST00000483631 SPANXN2Q5MJ10 180 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 CLUHP3Q96NS8 147 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 PBDC1Q9BVG4 233 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 SLC45A2Q9UMX9 530 aa14.38□□□□□ -0.11
HPS4-213ENST00000483631 SYNGR2O43760 224 aa14.37□□□□□ -0.11
HPS4-213ENST00000483631 ID1P41134 155 aa14.37□□□□□ -0.11
HPS4-213ENST00000483631 GGNBP1Q5YKI7 109 aa14.37□□□□□ -0.11
HPS4-213ENST00000483631 KRTAP17-1Q9BYP8 105 aa14.37□□□□□ -0.11
HPS4-213ENST00000483631 NAP1L6A6NFF2 107 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 IAPPP10997 89 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 PSMB3P49720 205 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 LYZP61626 148 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 SPATA31B1PQ5VZV4 182 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 SRRQ9GZT4 340 aa14.36□□□□□ -0.11
HPS4-213ENST00000483631 PRSS46E5RG02 174 aa14.35□□□□□ -0.11
HPS4-213ENST00000483631 S100A7P31151 101 aa14.35□□□□□ -0.11
HPS4-213ENST00000483631 FOXI2Q6ZQN5 318 aa14.35□□□□□ -0.11
HPS4-213ENST00000483631 NEU1Q99519 415 aa14.35□□□□□ -0.11
HPS4-213ENST00000483631 IGKV1OR2-108A0A075B7D4 117 aa14.34□□□□□ -0.11
HPS4-213ENST00000483631 SOCS3O14543 225 aa14.34□□□□□ -0.11
HPS4-213ENST00000483631 HLA-DMBP28068 263 aa14.34□□□□□ -0.11
HPS4-213ENST00000483631 MEOX2P50222 304 aa14.34□□□□□ -0.11
HPS4-213ENST00000483631 SAV1Q9H4B6 383 aaPredicted RBP14.34□□□□□ -0.11
HPS4-213ENST00000483631 CLEC5AQ9NY25 188 aa14.34□□□□□ -0.11
HPS4-213ENST00000483631 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
HPS4-213ENST00000483631 TRAV10A0A0B4J240 114 aa14.33□□□□□ -0.12
HPS4-213ENST00000483631 ISLRO14498 428 aa14.33□□□□□ -0.12
HPS4-213ENST00000483631 NDUFB6O95139 128 aa14.33□□□□□ -0.12
HPS4-213ENST00000483631 HOXB5P09067 269 aa14.33□□□□□ -0.12
HPS4-213ENST00000483631 OR8I2Q8N0Y5 310 aa14.33□□□□□ -0.12
HPS4-213ENST00000483631 PPP1R14BQ96C90 147 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms