RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 IGLV2-18A0A075B6J9 118 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 TRAV34A0A0B4J273 112 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 GPR31O00270 319 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 IGKV1-39P01597 117 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 IGKV1D-39P04432 117 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 NPY1RP25929 384 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 P2RY1P47900 373 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 ATP5IP56385 69 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-206ENST00000483030 PRCDQ00LT1 54 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 SPINK9Q5DT21 86 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 CDPF1Q6NVV7 123 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 OR6F1Q8NGZ6 308 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 RNF125Q96EQ8 232 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 SEC22AQ96IW7 307 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 RAB40CQ96S21 281 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 PARD6GQ9BYG4 376 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-206ENST00000483030 AP5S1Q9NUS5 200 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 RPH3ALQ9UNE2 315 aa5.3□□□□□ -1.56
CSDE1-206ENST00000483030 PKHD1P08F94 4074 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 IFNA21P01568 189 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 IFNA17P01571 189 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 CRYBB3P26998 211 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 SNCAP37840 140 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 CDC34P49427 236 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-206ENST00000483030 MEOX2P50222 304 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 TAS2R46P59540 309 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 IFITM2Q01629 132 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 SLAQ13239 276 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 IL18Q14116 193 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 MLANAQ16655 118 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 IZUMO4Q1ZYL8 232 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 TRIM16LQ309B1 348 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 PSMG4Q5JS54 123 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 Q6ZR54 194 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 SMIM15Q7Z3B0 74 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 LYSMD2Q8IV50 215 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 UBE2DNLQ8IWF7 75 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 BPIFCQ8NFQ6 507 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 OR5H2Q8NGV7 314 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 DCANP1Q8TF63 244 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 TMEM230Q96A57 120 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 MRGPRFQ96AM1 343 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 ZNF486Q96H40 463 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-206ENST00000483030 METTL26Q96S19 204 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 FXYD6Q9H0Q3 95 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 MRPL36Q9P0J6 103 aaKnown RBP5.29□□□□□ -1.56
CSDE1-206ENST00000483030 XCL2Q9UBD3 114 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 MUC4Q99102 2169 aa5.29□□□□□ -1.56
CSDE1-206ENST00000483030 DYNC1H1Q14204 4646 aaKnown RBP5.28□□□□□ -1.56
CSDE1-206ENST00000483030 HLA-DMAP28067 261 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 S100GP29377 79 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 RCVRNP35243 200 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 EMP1P54849 157 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 DHRS2Q13268 280 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 SOHLH1Q5JUK2 328 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 LPCAT3Q6P1A2 487 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 IZUMO2Q6UXV1 221 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 Q6ZRM9 215 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 Q8N3U1 123 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 GLMPQ8WWB7 406 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 S100A16Q96FQ6 103 aaKnown RBP5.28□□□□□ -1.56
CSDE1-206ENST00000483030 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
CSDE1-206ENST00000483030 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 OR51M1Q9H341 326 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 FAM212BQ9NTI7 297 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-206ENST00000483030 ANAPC10Q9UM13 185 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
CSDE1-206ENST00000483030 HELTA6NFD8 242 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 FAM25AB3EWG3 89 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 FAM25CB3EWG5 89 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 FAM25GB3EWG6 89 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 H3BMM0 161 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 ZNF701M0R085 212 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-206ENST00000483030 IGKV1-17P01599 117 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 CD74P04233 296 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 LINC00614P0C842 121 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 STAG3L2P0CL84 134 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 SPART-AS1P0CW21 52 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 RNASE2P10153 161 aaKnown RBP5.27□□□□□ -1.57
CSDE1-206ENST00000483030 HRH1P35367 487 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 OPRK1P41145 380 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 ETV6P41212 452 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 SUB1P53999 127 aaKnown RBP eCLIP5.27□□□□□ -1.57
CSDE1-206ENST00000483030 TAS2R20P59543 309 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 GABARAPL2P60520 117 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 NUTF2P61970 127 aaKnown RBP5.27□□□□□ -1.57
CSDE1-206ENST00000483030 TIGITQ495A1 244 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 TMEM69Q5SWH9 247 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 C1orf134Q5TEV5 83 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 SLC35G3Q8N808 338 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 OR4X1Q8NH49 305 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 FCGR1BQ92637 280 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 TPPP3Q9BW30 176 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 C1QTNF4Q9BXJ3 329 aa5.27□□□□□ -1.57
CSDE1-206ENST00000483030 FNDC4Q9H6D8 234 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-206ENST00000483030 U3KQE9 123 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms