RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 SCGB3A2Q96PL1 93 aa11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 MCUBQ9NWR8 336 aa11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 RABL2AQ9UBK7 228 aaPredicted RBP11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 RABL2BQ9UNT1 228 aa11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 U3KQ87 197 aa11.97□□□□□ -0.49
RAB11FIP3-209ENST00000483002 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 ANKRD20A5PA0PJZ0 165 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 CCR6P51684 374 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 ZNF767PQ75MW2 155 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 PBDC1Q9BVG4 233 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 RBKSQ9H477 322 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 HSPB7Q9UBY9 170 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 CELA1Q9UNI1 258 aa11.96□□□□□ -0.49
RAB11FIP3-209ENST00000483002 A0A0B4J2A0 478 aa11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 H3BMM0 161 aa11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 RNF125Q96EQ8 232 aa11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SEPSECSQ9HD40 501 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SHPKQ9UHJ6 478 aa11.95□□□□□ -0.5
RAB11FIP3-209ENST00000483002 ZFP92A6NM28 416 aa11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SUPT4H1P63272 117 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 C12orf74Q32Q52 190 aa11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 OR1S1Q8NH92 325 aa11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 RSL24D1Q9UHA3 163 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 DNAH10Q8IVF4 4471 aa11.94□□□□□ -0.5
RAB11FIP3-209ENST00000483002 DEFB131BA0A096LNP1 70 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 IGKV3-20P01619 116 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 ANXA3P12429 323 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 DEFB1P60022 68 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 ZNF90Q03938 601 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 GAMTQ14353 236 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
RAB11FIP3-209ENST00000483002 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 FABP12A6NFH5 140 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 HLA-DRB4P13762 266 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 TNFSF8P32971 234 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 NKX2-1P43699 371 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 FXYD7P58549 80 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 GDF5OSQ5U4N7 250 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SLC35E1Q96K37 410 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 HLA-DRB4X5D2U9 266 aa11.92□□□□□ -0.5
RAB11FIP3-209ENST00000483002 IGKV1D-37A0A075B6S9 117 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SNRPGP15A8MWD9 76 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 ID1P41134 155 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 EMP1P54849 157 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 TMBIM6P55061 237 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 ATP5IP56385 69 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 LYZP61626 148 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SRPXP78539 464 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 OR2F1Q13607 317 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 OR8G2PQ6IF36 304 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 GSG1LQ6UXU4 331 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SCRT1Q9BWW7 348 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 KRTAP17-1Q9BYP8 105 aa11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 WDR12Q9GZL7 423 aaKnown RBP11.91□□□□□ -0.5
RAB11FIP3-209ENST00000483002 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
RAB11FIP3-209ENST00000483002 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
RAB11FIP3-209ENST00000483002 SOSTQ9BQB4 213 aa11.9□□□□□ -0.5
RAB11FIP3-209ENST00000483002 PAIP2BQ9ULR5 123 aaKnown RBP11.9□□□□□ -0.5
RAB11FIP3-209ENST00000483002 FABP1P07148 127 aa11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 IAPPP10997 89 aa11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 OR4B1Q8NGF8 309 aa11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 COQ8AQ8NI60 647 aa11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 BCL7BQ9BQE9 202 aa11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 SLIRPQ9GZT3 109 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP3-209ENST00000483002 AMBPP02760 352 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 RAB11AP62491 216 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 C1orf194Q5T5A4 169 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 FOXI2Q6ZQN5 318 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 OR8I2Q8N0Y5 310 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 MCFD2Q8NI22 146 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 NEU1Q99519 415 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 NDUFAF3Q9BU61 184 aa11.88□□□□□ -0.51
RAB11FIP3-209ENST00000483002 PIGBOS1A0A0B4J2F0 54 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 PITX3O75364 302 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 ZNF705DP0CH99 300 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 ZNF705BP0CI00 300 aaPredicted RBP11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 VAMP1P23763 118 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 FAUP35544 74 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 PSMB3P49720 205 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 POM121L12Q8N7R1 296 aa11.87□□□□□ -0.51
RAB11FIP3-209ENST00000483002 TRGV9Q99603 122 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms