RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 LOXP28300 417 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-220ENST00000482507 DLX6P56179 175 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 KRTDAPP60985 99 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 PDPNQ86YL7 162 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 THAP8Q8NA92 274 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF596Q8TC21 504 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 KCNS1Q96KK3 526 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 NRN1Q9NPD7 142 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 LRBAP50851 2863 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 PEX7O00628 323 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF253O75346 499 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 MOSP00540 346 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 PMCHP20382 165 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 AMTP48728 403 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 MFAP2P55001 183 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 RNF2Q99496 336 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 MIEN1Q9BRT3 115 aa11.93□□□□□ -0.5
ATG4B-220ENST00000482507 KMT2BQ9UMN6 2715 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-220ENST00000482507 ANKHD1Q8IWZ3 2542 aaKnown RBP11.93□□□□□ -0.5
ATG4B-220ENST00000482507 UTP20O75691 2785 aaKnown RBP11.93□□□□□ -0.5
ATG4B-220ENST00000482507 CORTO00230 105 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 MYCNOSP40205 109 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 PRB3Q04118 309 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-220ENST00000482507 FAM19A2Q8N3H0 131 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 OR4A5Q8NH83 315 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 SGK494Q96LW2 274 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 VAMP8Q9BV40 100 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 C7orf69Q9H7B7 122 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 APELAP0DMC3 54 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 NIT1Q86X76 327 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 C11orf42Q8N5U0 333 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 LINC00311Q8N616 119 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 NUDT10Q8NFP7 164 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 TMEM186Q96B77 213 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 NUDT11Q96G61 164 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 ABCA4P78363 2273 aa11.92□□□□□ -0.5
ATG4B-220ENST00000482507 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 NDUFB3O43676 98 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 APCSP02743 223 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 G0S2P27469 103 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 OR1L4Q8NGR5 311 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 CNTFRP26992 372 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 PRR27Q6MZM9 219 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 NUP35Q8NFH5 326 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 TSKUQ8WUA8 353 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 ITLN2Q8WWU7 325 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-220ENST00000482507 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF324O75467 553 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-220ENST00000482507 ORM2P19652 201 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 COX19Q49B96 90 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 LRRC10Q5BKY1 277 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 FAM231DQ6ZW35 169 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 C18orf32Q8TCD1 76 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 IGHV3-21A0A0B4J1V1 117 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 A6NNC1 897 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF137PP52743 207 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 RPL19P84098 196 aaKnown RBP11.9□□□□□ -0.5
ATG4B-220ENST00000482507 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 FAM208BQ5VWN6 2430 aa11.9□□□□□ -0.5
ATG4B-220ENST00000482507 CRYGCP07315 174 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 CTRLP40313 264 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 SUB1P53999 127 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 BPIFB3P59826 476 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 WIPF2Q8TF74 440 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 DCHS2Q6V1P9 2916 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 ENSAO43768 121 aaKnown RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 IGHV1-8P0DP01 117 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 OR1B1Q8NGR6 318 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-220ENST00000482507 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
ATG4B-220ENST00000482507 H3BTX0 84 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 GPR6P46095 362 aaPredicted RBP11.88□□□□□ -0.51
ATG4B-220ENST00000482507 ZNF124Q15973 351 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 FBXL19-AS1Q494R0 122 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms