RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 KMT2AQ03164 3969 aa9.79□□□□□ -0.84
CTDSP1-208ENST00000482272 GIG44P09565 113 aaPredicted RBP9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 PSG1P11464 419 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 NUP62P37198 522 aaPredicted RBP9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 PSMG4Q5JS54 123 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 SIGLEC15Q6ZMC9 328 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 TOMM5Q8N4H5 51 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 TRIM63Q969Q1 353 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 HRH4Q9H3N8 390 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
CTDSP1-208ENST00000482272 DUXBA0A1W2PPF3 345 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 FABP1P07148 127 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 AP3S2P59780 193 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 PYDC2Q56P42 97 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 TMEM128Q5BJH2 165 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 Q8NAQ8 132 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 RNF125Q96EQ8 232 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 SLC35E1Q96K37 410 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 C1QTNF4Q9BXJ3 329 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 V9GYH0 126 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 AGRNO00468 2067 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 FRAS1Q86XX4 4008 aa9.77□□□□□ -0.85
CTDSP1-208ENST00000482272 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 ZNF705EA8MWA4 302 aaPredicted RBP9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 SNRPGP15A8MWD9 76 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 FAM90A26D6RGX4 464 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 RBMY1A1P0DJD3 496 aaKnown RBP9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 RBMY1CP0DJD4 496 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 C4BPBP20851 252 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 RAB11AP62491 216 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 GAMTQ14353 236 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 RBMY1FQ15415 496 aaKnown RBP9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 ZNF79Q15937 498 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 TMED4Q7Z7H5 227 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 PBDC1Q9BVG4 233 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 TBC1D24Q9ULP9 559 aa9.76□□□□□ -0.85
CTDSP1-208ENST00000482272 IGLL5B9A064 214 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 S100A5P33763 92 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 GSG1LQ6UXU4 331 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 CSNK1G2-AS1Q8NCQ2 148 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 X6R8D5 127 aa9.75□□□□□ -0.85
CTDSP1-208ENST00000482272 PITX3O75364 302 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 MED6O75586 246 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 DEDDO75618 318 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 HLA-DMBP28068 263 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 ID1P41134 155 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 RPP30P78346 268 aaKnown RBP9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 ZNF90Q03938 601 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 DEDD2Q8WXF8 326 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 SLC25A21Q9BQT8 299 aaPredicted RBP9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 PAIP2BQ9ULR5 123 aaKnown RBP9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 TMED3Q9Y3Q3 217 aa9.74□□□□□ -0.85
CTDSP1-208ENST00000482272 IGKV1D-37A0A075B6S9 117 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 CCDC160A6NGH7 325 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 H3BMM0 161 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 SLC25A6P12236 298 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 VAMP1P23763 118 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 NKX2-1P43699 371 aaPredicted RBP9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 C1orf194Q5T5A4 169 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 CIB3Q96Q77 187 aaPredicted RBP9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 RBM38Q9H0Z9 239 aaKnown RBP9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
CTDSP1-208ENST00000482272 ELOA3CA0A087WX78 387 aaPredicted RBP9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 SFT2D2O95562 160 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 CFDP00746 253 aaPredicted RBP9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 IAPPP10997 89 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 LYZP61626 148 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 LINC00052Q96N35 136 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 TRGV9Q99603 122 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
CTDSP1-208ENST00000482272 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.85
CTDSP1-208ENST00000482272 SYNGR2O43760 224 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 HLA-DRB4P13762 266 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 DEFB1P60022 68 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 OR2F1Q13607 317 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 Q6ZTC4 211 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 HLA-DRB4X5D2U9 266 aa9.71□□□□□ -0.86
CTDSP1-208ENST00000482272 HOXB5P09067 269 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 S100A7P31151 101 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 PSMB3P49720 205 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 FOXI2Q6ZQN5 318 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 SAV1Q9H4B6 383 aaPredicted RBP9.7□□□□□ -0.86
CTDSP1-208ENST00000482272 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
CTDSP1-208ENST00000482272 IGKV1OR2-108A0A075B7D4 117 aa9.69□□□□□ -0.86
CTDSP1-208ENST00000482272 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms