RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 HIST1H2BMQ99879 126 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 CHAC1Q9BUX1 264 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 SEC11CQ9BY50 192 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 GFRA4Q9GZZ7 299 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 DUSP21Q9H596 190 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 ZNF586Q9NXT0 402 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 C21orf62Q9NYP8 219 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 CCDC167Q9P0B6 97 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 DEC1Q9P2X7 70 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 ZNF835Q9Y2P0 537 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 CSAG2Q9Y5P2 127 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 NSD3Q9BZ95 1437 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 CCDC88BA6NC98 1476 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 CEP164Q9UPV0 1460 aa2.9□□□□□ -1.95
VPS41-212ENST00000482217 MYH8P13535 1937 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 MYLKQ15746 1914 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 ANKRD12Q6UB98 2062 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 SIPA1L1O43166 1804 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 IGLV3-10A0A075B6K4 115 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 IGHV3-72A0A0B4J1Y9 119 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 OR51F1A6NGY5 319 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 GEMIN2O14893 280 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 GAS8-AS1O95177 125 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 CGAP01215 116 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 MT-ND6P03923 174 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 MT-ATP8P03928 68 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 IFITM1P13164 125 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 ZNF32P17041 273 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 CLIP1P30622 1438 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 SNRPD3P62318 126 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 RPL30P62888 115 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 HBBP68871 147 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 CCL20P78556 96 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LGALS9BQ3B8N2 356 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 MPV17L2Q567V2 206 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 FAM182AQ5T1J6 154 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 Q6AWC8 147 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LGALS9CQ6DKI2 356 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 Q6ZUT4 128 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 SCXQ7RTU7 201 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 ZNF720Q7Z2F6 126 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 ADM2Q7Z4H4 148 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 KRTAP7-1Q8IUC3 87 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LSM10Q969L4 123 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 CHCHD5Q9BSY4 110 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 VAMP8Q9BV40 100 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 RERGLQ9H628 205 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 IL36BQ9NZH7 164 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LSM2Q9Y333 95 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 MYO5AQ9Y4I1 1855 aaKnown RBP2.89□□□□□ -1.95
VPS41-212ENST00000482217 LINC00588Q9Y4M8 146 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 LINC00312Q9Y6C7 94 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 CC2D2AQ9P2K1 1620 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 MCM3APO60318 1980 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 NUP98P52948 1817 aa2.89□□□□□ -1.95
VPS41-212ENST00000482217 ZC3H13Q5T200 1668 aaKnown RBP2.88□□□□□ -1.95
VPS41-212ENST00000482217 ZNF407Q9C0G0 2248 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 CASZ1Q86V15 1759 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 TRBV27A0A0K0K1C4 114 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 CYSRT1A8MQ03 144 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 OOSP1A8MZH6 123 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 IGKV1-16P04430 117 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 PRM2P04554 102 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 ZNF688P0C7X2 276 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 CGB3P0DN86 165 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 CGB7P0DN87 165 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 PYYP10082 97 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 HLA-DRB4P13762 266 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 ELK1P19419 428 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 DYNLT3P51808 116 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 UBE2BP63146 152 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 DCDP81605 110 aaKnown RBP2.88□□□□□ -1.95
VPS41-212ENST00000482217 FOXF1Q12946 379 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 KLRD1Q13241 179 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 KISS1Q15726 138 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 C6orf52Q5T4I8 152 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 C9orf153Q5TBE3 101 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 UNQ5815/PRO19632Q6UWF5 114 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 IGFL3Q6UXB1 125 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 PHF5AQ7RTV0 110 aaKnown RBP2.88□□□□□ -1.95
VPS41-212ENST00000482217 SPATA12Q7Z6I5 190 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 C10orf126Q8N4M7 172 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 KCNRGQ8N5I3 272 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 C3orf56Q8N813 242 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 OR4B1Q8NGF8 309 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 B9D2Q9BPU9 175 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 AGPAT4-IT1Q9H0P7 198 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 EPDR1Q9UM22 224 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 CHCHD2Q9Y6H1 151 aaPredicted RBP2.88□□□□□ -1.95
VPS41-212ENST00000482217 HLA-DRB4X5D2U9 266 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 HEATR5AQ86XA9 2040 aa2.88□□□□□ -1.95
VPS41-212ENST00000482217 MYO18AQ92614 2054 aaKnown RBP2.88□□□□□ -1.95
VPS41-212ENST00000482217 GLI3P10071 1580 aa2.87□□□□□ -1.95
VPS41-212ENST00000482217 RBBP6Q7Z6E9 1792 aaKnown RBP2.87□□□□□ -1.95
VPS41-212ENST00000482217 KDM6AO15550 1401 aaPredicted RBP2.87□□□□□ -1.95
VPS41-212ENST00000482217 TRAV12-2A0A075B6T6 113 aa2.87□□□□□ -1.95
VPS41-212ENST00000482217 CD7P09564 240 aa2.87□□□□□ -1.95
VPS41-212ENST00000482217 ZNF286BP0CG31 522 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms