RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RIIAD1A6NNX1 92 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 FABP5P3A8MUU1 101 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 PIRO00625 290 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 CD7P09564 240 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 CCL3P10147 92 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 CRYBB3P26998 211 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 CMPK1P30085 196 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 GABRA2P47869 451 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 NCS1P62166 190 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 RPS25P62851 125 aaKnown RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 HERVK_113P63121 156 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 FABP9Q0Z7S8 132 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 GLYATL3Q5SZD4 288 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 Q5XG85 94 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 OR8I2Q8N0Y5 310 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 TMEM229BQ8NBD8 167 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 OR2T27Q8NH04 317 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 FNDC9Q8TBE3 224 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 ERMAPQ96PL5 475 aaPredicted RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 MGLLQ99685 303 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 ZNF471Q9BX82 626 aaPredicted RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 TRAPPC2LQ9UL33 140 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 CYSLTR1Q9Y271 337 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 HS3ST2Q9Y278 367 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 MED31Q9Y3C7 131 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 MAST2Q6P0Q8 1798 aa2.08□□□□□ -2.08
SF3B1-210ENST00000482158 N4BP2Q86UW6 1770 aaPredicted RBP2.08□□□□□ -2.08
SF3B1-210ENST00000482158 NEO1Q92859 1461 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 ARHGEF11O15085 1522 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CLDN25C9JDP6 229 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 H7BYZ3 331 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 M0R381 172 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CORTO00230 105 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 APOMO95445 188 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 IFNA7P01567 189 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 IFNA17P01571 189 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 SCTP09683 121 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 NPPCP23582 126 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CRHBPP24387 322 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 PKIAP61925 76 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 PPP3R1P63098 170 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 SLC38A11Q08AI6 406 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CCSMST1Q4G0I0 132 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 NUP35Q8NFH5 326 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 OR4E2Q8NGC2 313 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 SLC25A40Q8TBP6 338 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 ISOC1Q96CN7 298 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CARD19Q96LW7 228 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 OR8D2Q9GZM6 311 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CST9LQ9H4G1 147 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 CXorf21Q9HAI6 301 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 OR5AC2Q9NZP5 309 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 SNX12Q9UMY4 172 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 AMMECR1Q9Y4X0 333 aaPredicted RBP2.07□□□□□ -2.08
SF3B1-210ENST00000482158 ARHGAP31Q2M1Z3 1444 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 MBD5Q9P267 1494 aa2.07□□□□□ -2.08
SF3B1-210ENST00000482158 KDM5AP29375 1690 aaKnown RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 IGHV1-69-2A0A0G2JMI3 117 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 TMEM269A0A1B0GVZ9 245 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 TRDV1A0A1B0GX56 115 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 A8MUN3 132 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 FNDC10F2Z333 226 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 J3QQQ9 107 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 M0R2Z0 102 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 LST1O00453 97 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 PGLYRP1O75594 196 aaPredicted RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 HLA-DQB2P05538 268 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SMIM17P0DL12 118 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SMIM10L2AP0DMW4 78 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SMIM10L2BP0DMW5 78 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 PPIBP23284 216 aaKnown RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 OR10J1P30954 320 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 EIF2B2P49770 351 aaKnown RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SCGB2B2Q4G0G5 96 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 Q6ZS49 121 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 C2orf91Q6ZV80 131 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 LHFPL1Q86WI0 220 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SNX29P2Q8IUI4 249 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 TCTE3Q8IZS6 198 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 OR51T1Q8NGJ9 327 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 SFT2D1Q8WV19 159 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 NMNAT3Q96T66 252 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 PRADC1Q9BSG0 188 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 C11orf68Q9H3H3 251 aaKnown RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 FBXL12Q9NXK8 326 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 TAAR3PQ9P1P4 343 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 ZFP30Q9Y2G7 519 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 MYH13Q9UKX3 1938 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 PRG4Q92954 1404 aaPredicted RBP2.06□□□□□ -2.08
SF3B1-210ENST00000482158 MED14O60244 1454 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 ERICH3Q5RHP9 1530 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 ZFYVE16Q7Z3T8 1539 aa2.06□□□□□ -2.08
SF3B1-210ENST00000482158 KIF13AQ9H1H9 1805 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 ANAPC1Q9H1A4 1944 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 SCN9AQ15858 1988 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 TRAV5A0A0B4J249 113 aa2.05□□□□□ -2.08
SF3B1-210ENST00000482158 TRAV38-1A0A0B4J264 116 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms