RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MPPED2Q15777 294 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 CCDC58Q4VC31 144 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 TBPL2Q6SJ96 375 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 ACOT12Q8WYK0 555 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 SMIM14Q96QK8 99 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 NRIP2Q9BQI9 281 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 ULBP3Q9BZM4 244 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 GTSF1LQ9H1H1 148 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 ZNF586Q9NXT0 402 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 C5orf49A4QMS7 147 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 ATP6V1G2-DDX39BF2Z307 99 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 UPK2O00526 184 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 EIF1BO60739 113 aaKnown RBP2.23□□□□□ -2.05
SMC6-208ENST00000481708 LGALS1P09382 135 aaKnown RBP2.23□□□□□ -2.05
SMC6-208ENST00000481708 EIF1P41567 113 aaKnown RBP2.23□□□□□ -2.05
SMC6-208ENST00000481708 ARFRP1Q13795 201 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 TMUB2Q71RG4 321 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 KRTAP7-1Q8IUC3 87 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 OR13C6PQ8NH95 151 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 MCFD2Q8NI22 146 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 TYMSOSQ8TAI1 123 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 PATE1Q8WXA2 126 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 C1orf147Q96MC9 270 aaPredicted RBP2.23□□□□□ -2.05
SMC6-208ENST00000481708 SOSTQ9BQB4 213 aa2.23□□□□□ -2.05
SMC6-208ENST00000481708 ZFP92A6NM28 416 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 KNCNA6PVL3 124 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 RPL36A-HNRNPH2H7BZ11 118 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PROSCO94903 275 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 C1GALT1C1LP0DN25 315 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 OR10J1P30954 320 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 NDUFA5Q16718 116 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 DEFB109BQ30KR1 87 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PLPPR5Q32ZL2 321 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 NCMAPQ5T1S8 102 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 BORCS7Q96B45 105 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 ZNF799Q96GE5 643 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 OR52E6Q96RD3 313 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 ZNF286AQ9HBT8 521 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 NUFIP1Q9UHK0 495 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 PAIP2BQ9ULR5 123 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 TACC2O95359 2948 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 A0A1W2PQD3 144 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 E7EQ34 232 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 TXNDC9O14530 226 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 LTAP01374 205 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 IGHV3-13P01766 116 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 KDELR1P24390 212 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 NPY1RP25929 384 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 TALDO1P37837 337 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 SAMD13Q5VXD3 122 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 SLC25A42Q86VD7 318 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 GPHB5Q86YW7 130 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 TWIST2Q8WVJ9 160 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 ZHX1-C8orf76Q96EF9 292 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 MRPL48Q96GC5 212 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 OR7D2Q96RA2 312 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 MED28Q9H204 178 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 C11orf68Q9H3H3 251 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 COL6A5A8TX70 2615 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 A0A1B0GW64 132 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 INS-IGF2F8WCM5 200 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 HLA-DRB1P01911 266 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 SERPINE1P05121 402 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 OGNP20774 298 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 CDK2P24941 298 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 ATP5G3P48201 142 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PSMB2P49721 201 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 ESRRGP62508 458 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 LRP11Q86VZ4 500 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PDPNQ86YL7 162 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 SLC22A24Q8N4F4 322 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 OR5K1Q8NHB7 308 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 COQ8AQ8NI60 647 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 THEM6Q8WUY1 208 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PARVBQ9HBI1 364 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 PYCARDQ9ULZ3 195 aa2.22□□□□□ -2.05
SMC6-208ENST00000481708 FLNAP21333 2647 aaKnown RBP2.22□□□□□ -2.05
SMC6-208ENST00000481708 hCG_1818297A0A087WSY0 165 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 LOC107984640A0A0U1RRK4 108 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.05
SMC6-208ENST00000481708 SERF1AO75920 110 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 CRYBA1P05813 215 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 MEOX2P50222 304 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 RPL36AP83881 106 aaKnown RBP2.21□□□□□ -2.05
SMC6-208ENST00000481708 MYL5Q02045 173 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 C4orf22Q6V702 233 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 OR10G4Q8NGN3 311 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 STARD4Q96DR4 205 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 AIF1LQ9BQI0 150 aa2.21□□□□□ -2.05
SMC6-208ENST00000481708 RPUSD1Q9UJJ7 312 aaKnown RBP2.21□□□□□ -2.05
SMC6-208ENST00000481708 F8W036 122 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 HLA-DPB1P04440 258 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 NMUP48645 174 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 BSPH1Q075Z2 132 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 KLHL12Q53G59 568 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 Q6ZR03 302 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 TCF24Q7RTU0 167 aa2.21□□□□□ -2.06
SMC6-208ENST00000481708 WDR86Q86TI4 376 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms