RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 C4BPBP20851 252 aa16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 TMEM41BQ5BJD5 291 aa16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 TMEM128Q5BJH2 165 aa16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 MORN3Q6PF18 240 aaPredicted RBP16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 SLC35E1Q96K37 410 aa16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 PBDC1Q9BVG4 233 aa16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 PAIP2BQ9ULR5 123 aaKnown RBP16.19■□□□□ 0.18
GPCPD1-206ENST00000481690 DUXBA0A1W2PPF3 345 aa16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 GIG44P09565 113 aaPredicted RBP16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 IAPPP10997 89 aa16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 ZNF79Q15937 498 aa16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 SIGLEC15Q6ZMC9 328 aa16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 RNF125Q96EQ8 232 aa16.18■□□□□ 0.18
GPCPD1-206ENST00000481690 BUB3O43684 328 aa16.17■□□□□ 0.18
GPCPD1-206ENST00000481690 SNRPD3P62318 126 aaKnown RBP16.17■□□□□ 0.18
GPCPD1-206ENST00000481690 RAB40CQ96S21 281 aa16.17■□□□□ 0.18
GPCPD1-206ENST00000481690 NRN1Q9NPD7 142 aa16.17■□□□□ 0.18
GPCPD1-206ENST00000481690 CLEC5AQ9NY25 188 aa16.17■□□□□ 0.18
GPCPD1-206ENST00000481690 FAM90A26D6RGX4 464 aa16.16■□□□□ 0.18
GPCPD1-206ENST00000481690 ATP5IP56385 69 aaPredicted RBP16.16■□□□□ 0.18
GPCPD1-206ENST00000481690 GAMTQ14353 236 aa16.16■□□□□ 0.18
GPCPD1-206ENST00000481690 Q8NAQ8 132 aa16.16■□□□□ 0.18
GPCPD1-206ENST00000481690 SLC25A21Q9BQT8 299 aaPredicted RBP16.16■□□□□ 0.18
GPCPD1-206ENST00000481690 IGHV4-28A0A0C4DH34 117 aa16.15■□□□□ 0.18
GPCPD1-206ENST00000481690 GPX4P36969 197 aaPredicted RBP16.15■□□□□ 0.18
GPCPD1-206ENST00000481690 ZNF90Q03938 601 aa16.15■□□□□ 0.18
GPCPD1-206ENST00000481690 IGKV1D-37A0A075B6S9 117 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 PITX3O75364 302 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 SFT2D2O95562 160 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 NUP62P37198 522 aaPredicted RBP16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 LYZP61626 148 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 RAB11AP62491 216 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 PPP1R1AQ13522 171 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 LRTM2Q8N967 370 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 PFDN2Q9UHV9 154 aa16.14■□□□□ 0.17
GPCPD1-206ENST00000481690 MED6O75586 246 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 FABP1P07148 127 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 MIFP14174 115 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 OR2F1Q13607 317 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 OR8G2PQ6IF36 304 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 CCDC190Q86UF4 302 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 DEDD2Q8WXF8 326 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 MAGT1Q9H0U3 335 aa16.13■□□□□ 0.17
GPCPD1-206ENST00000481690 HOXB5P09067 269 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 RBMY1A1P0DJD3 496 aaKnown RBP16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 RBMY1CP0DJD4 496 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 SLC25A6P12236 298 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 RBMY1FQ15415 496 aaKnown RBP16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 SPANXN2Q5MJ10 180 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 PPP1R14BQ96C90 147 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 TBC1D24Q9ULP9 559 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 TMED3Q9Y3Q3 217 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 X6R8D5 127 aa16.12■□□□□ 0.17
GPCPD1-206ENST00000481690 ZNF705EA8MWA4 302 aaPredicted RBP16.11■□□□□ 0.17
GPCPD1-206ENST00000481690 INPP1P49441 399 aa16.11■□□□□ 0.17
GPCPD1-206ENST00000481690 C2CD4CQ8TF44 421 aa16.11■□□□□ 0.17
GPCPD1-206ENST00000481690 SEPSECSQ9HD40 501 aaKnown RBP16.11■□□□□ 0.17
GPCPD1-206ENST00000481690 SNRPGP15A8MWD9 76 aa16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 WRBO00258 174 aa16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 NUTF2P61970 127 aaKnown RBP16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 RPP30P78346 268 aaKnown RBP16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 LGALS9CQ6DKI2 356 aa16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 RPP25LQ8N5L8 163 aaKnown RBP16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 CIB3Q96Q77 187 aaPredicted RBP16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 TRGV9Q99603 122 aa16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 SRRQ9GZT4 340 aa16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 RBM38Q9H0Z9 239 aaKnown RBP16.1■□□□□ 0.17
GPCPD1-206ENST00000481690 H3BMM0 161 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 SYNGR2O43760 224 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 DEDDO75618 318 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 GGNBP1Q5YKI7 109 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 CSNK1G2-AS1Q8NCQ2 148 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 LINC00052Q96N35 136 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 C1QTNF4Q9BXJ3 329 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 HRH4Q9H3N8 390 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 XCL2Q9UBD3 114 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 BIRC6Q9NR09 4857 aa16.09■□□□□ 0.17
GPCPD1-206ENST00000481690 HLA-DRB4P13762 266 aa16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 NKX2-1P43699 371 aaPredicted RBP16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 SPANXN5Q5MJ07 72 aa16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 TRIQKQ629K1 86 aa16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 WDR12Q9GZL7 423 aaKnown RBP16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 HLA-DRB4X5D2U9 266 aa16.08■□□□□ 0.16
GPCPD1-206ENST00000481690 ELOA3CA0A087WX78 387 aaPredicted RBP16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 IGLL5B9A064 214 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 C11orf94C9JXX5 98 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 H3BP45 60 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 IGKV3-20P01619 116 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 HLA-DMBP28068 263 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 ID1P41134 155 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 DEFB1P60022 68 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 GSG1LQ6UXU4 331 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 COQ8AQ8NI60 647 aa16.07■□□□□ 0.16
GPCPD1-206ENST00000481690 IGKV1OR2-108A0A075B7D4 117 aa16.06■□□□□ 0.16
GPCPD1-206ENST00000481690 C1orf194Q5T5A4 169 aa16.06■□□□□ 0.16
GPCPD1-206ENST00000481690 GDF5OSQ5U4N7 250 aa16.06■□□□□ 0.16
GPCPD1-206ENST00000481690 OR8I2Q8N0Y5 310 aa16.06■□□□□ 0.16
GPCPD1-206ENST00000481690 THAP8Q8NA92 274 aa16.06■□□□□ 0.16
GPCPD1-206ENST00000481690 LINC00854A0A1B0GVQ3 168 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms