RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ARL3P36405 182 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 RAB2AP61019 212 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 RHOBP62745 196 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 TMEM182Q6ZP80 229 aaPredicted RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 C4orf3Q8WVX3 66 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 ACTR3CQ9C0K3 210 aaPredicted RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 TSSC4Q9Y5U2 329 aaPredicted RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 A0A1W2PPV4 95 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 WI2-2373I1.2A0A1W2PRP0 233 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 NUDT19A8MXV4 375 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 HYPMO75409 117 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 HBE1P02100 147 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 HSPB1P04792 205 aaKnown RBP7.86□□□□□ -1.15
USP39-215ENST00000481409 RPLP1P05386 114 aaKnown RBP7.86□□□□□ -1.15
USP39-215ENST00000481409 OR5G3P0C626 314 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 PSG1P11464 419 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 ZP3P21754 424 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 GPR183P32249 361 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 TAS2R45P59539 299 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 ZNF90Q03938 601 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 TIGITQ495A1 244 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 MIC13Q5XKP0 118 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 GPHB5Q86YW7 130 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 STXBP6Q8NFX7 210 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 MTORP42345 2549 aa7.86□□□□□ -1.15
USP39-215ENST00000481409 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 ZNF705EA8MWA4 302 aaPredicted RBP7.85□□□□□ -1.15
USP39-215ENST00000481409 I3L521 148 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 COX7A2P2O60397 106 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 ADMP35318 185 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 ELLP55199 621 aaPredicted RBP7.85□□□□□ -1.15
USP39-215ENST00000481409 FAM106AQ4KMX7 169 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 C10orf113Q5VZT2 155 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 MBD3L1Q8WWY6 194 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 RPRMQ9NS64 109 aa7.85□□□□□ -1.15
USP39-215ENST00000481409 MRPL27Q9P0M9 148 aaKnown RBP7.85□□□□□ -1.15
USP39-215ENST00000481409 ZFHX3Q15911 3703 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 K7EMT4 169 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 LGALS9O00182 355 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 YIF1AO95070 293 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 BMI1P35226 326 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
USP39-215ENST00000481409 PPT1P50897 306 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 PMS2P11Q13670 270 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 PQLC2Q6ZP29 291 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 RPP25LQ8N5L8 163 aaKnown RBP7.84□□□□□ -1.15
USP39-215ENST00000481409 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 NARS2Q96I59 477 aaKnown RBP7.84□□□□□ -1.15
USP39-215ENST00000481409 GPR82Q96P67 336 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 MED9Q9NWA0 146 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 TECRQ9NZ01 308 aaKnown RBP7.84□□□□□ -1.15
USP39-215ENST00000481409 FUT9Q9Y231 359 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 HIGD1AQ9Y241 93 aa7.84□□□□□ -1.15
USP39-215ENST00000481409 PUS1Q9Y606 427 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP39-215ENST00000481409 A0A1W2PS18 150 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 IGHV3-23P01764 117 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 IL4P05112 153 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 NMBP08949 121 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 TAGLN2P37802 199 aaKnown RBP7.83□□□□□ -1.16
USP39-215ENST00000481409 LYZP61626 148 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 RPEL1Q2QD12 228 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 KHDC3LQ587J8 217 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 TCTEX1D4Q5JR98 221 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 FAM74A1Q5RGS3 127 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 C1orf194Q5T5A4 169 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 C10orf99Q6UWK7 81 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 NDUFA11Q86Y39 141 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 OR1B1Q8NGR6 318 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 FAM213BQ8TBF2 198 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 TMEM37Q8WXS4 190 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 RAB24Q969Q5 203 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 RCC1LQ96I51 464 aaKnown RBP7.83□□□□□ -1.16
USP39-215ENST00000481409 METTL26Q96S19 204 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 ZFAND3Q9H8U3 227 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 GNB4Q9HAV0 340 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 RABAC1Q9UI14 185 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 UFC1Q9Y3C8 167 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 S4R3C0 116 aa7.83□□□□□ -1.16
USP39-215ENST00000481409 ANKRD34BA5PLL1 514 aa7.82□□□□□ -1.16
USP39-215ENST00000481409 LINC01619G3V211 115 aa7.82□□□□□ -1.16
USP39-215ENST00000481409 CXorf1O96002 111 aa7.82□□□□□ -1.16
USP39-215ENST00000481409 IGHV3-11P01762 117 aa7.82□□□□□ -1.16
USP39-215ENST00000481409 CD5P06127 495 aa7.82□□□□□ -1.16
USP39-215ENST00000481409 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms