RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 U3KQE9 123 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 SNRPGP15A8MWD9 76 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 C11orf94C9JXX5 98 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
CCM2-213ENST00000480658 MIFP14174 115 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 ID1P41134 155 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 DHRS2Q13268 280 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 GGNBP1Q5YKI7 109 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 CCDC190Q86UF4 302 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 OR11H2Q8NH07 326 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 COQ8AQ8NI60 647 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 NPIPB3Q92617 1050 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 SLC45A2Q9UMX9 530 aa8.42□□□□□ -1.06
CCM2-213ENST00000480658 BUB3O43684 328 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 PITX3O75364 302 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 SFT2D2O95562 160 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 IFNA21P01568 189 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 PSG1P11464 419 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 MEOX2P50222 304 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 PMS2P11Q13670 270 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 ZNF79Q15937 498 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 SPATA31B1PQ5VZV4 182 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 LEMD1Q68G75 181 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
CCM2-213ENST00000480658 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 NDUFA13Q9P0J0 144 aa8.41□□□□□ -1.06
CCM2-213ENST00000480658 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
CCM2-213ENST00000480658 RYR3Q15413 4870 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 SYNGR2O43760 224 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 NXPH3O95157 252 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
CCM2-213ENST00000480658 USF2Q15853 346 aaPredicted RBP8.4□□□□□ -1.06
CCM2-213ENST00000480658 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 GPR82Q96P67 336 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 TRGV9Q99603 122 aa8.4□□□□□ -1.06
CCM2-213ENST00000480658 WRBO00258 174 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 PSMB3P49720 205 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 PPP1R1AQ13522 171 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 GAMTQ14353 236 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 MLANAQ16655 118 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 LILRB2Q8N423 598 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 PPP1R14BQ96C90 147 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 LYSTQ99698 3801 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 PBDC1Q9BVG4 233 aa8.39□□□□□ -1.07
CCM2-213ENST00000480658 RBM38Q9H0Z9 239 aaKnown RBP8.39□□□□□ -1.07
CCM2-213ENST00000480658 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
CCM2-213ENST00000480658 TEX48A0A1B0GUV7 120 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 NDUFB6O95139 128 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 GALR1P47211 349 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 ZNF124Q15973 351 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 ACTL10Q5JWF8 245 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 BPIFCQ8NFQ6 507 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
CCM2-213ENST00000480658 SRRQ9GZT4 340 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 PAIP2BQ9ULR5 123 aaKnown RBP8.38□□□□□ -1.07
CCM2-213ENST00000480658 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
CCM2-213ENST00000480658 ZNF705EA8MWA4 302 aaPredicted RBP8.37□□□□□ -1.07
CCM2-213ENST00000480658 ISLRO14498 428 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 LY6G6CO95867 125 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 LYZP61626 148 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 AKR1C1Q04828 323 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 OR8I2Q8N0Y5 310 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 THAP8Q8NA92 274 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 OR4D5Q8NGN0 318 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 C2CD4CQ8TF44 421 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 CLUHP3Q96NS8 147 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 PRR13Q9NZ81 148 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 TBC1D24Q9ULP9 559 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
CCM2-213ENST00000480658 DYNC2H1Q8NCM8 4307 aaKnown RBP8.37□□□□□ -1.07
CCM2-213ENST00000480658 C9orf170A2RU37 121 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 FNDC10F2Z333 226 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 HOXB5P09067 269 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 SELENOTP62341 195 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 LGALS9CQ6DKI2 356 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 FOXI2Q6ZQN5 318 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
CCM2-213ENST00000480658 SMIM9A6NGZ8 99 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 OR4E1P0C645 316 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 IAPPP10997 89 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 TAS2R30P59541 319 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 ZNF90Q03938 601 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 SPANXN5Q5MJ07 72 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 LINC00299Q6ZSB3 139 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 Q8NAQ8 132 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 TMEM147Q9BVK8 224 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 RPRMQ9NS64 109 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms