RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ERVS71-1P61550 626 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 AESQ08117 197 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 PMAIP1Q13794 54 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 GUK1Q16774 197 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 C11orf40Q8WZ69 217 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 PPP1R14BQ96C90 147 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 CCDC42Q96M95 316 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 PRAP1Q96NZ9 151 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 PPP1R2P1Q96PQ5 205 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 MRPS26Q9BYN8 205 aaKnown RBP0.61□□□□□ -2.31
CALD1-219ENST00000480638 OR51V1Q9H2C8 321 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 CISHQ9NSE2 258 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 IL36BQ9NZH7 164 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 TP73-AS1Q9UF72 201 aa0.61□□□□□ -2.31
CALD1-219ENST00000480638 WRNQ14191 1432 aaPredicted RBP eCLIP0.61□□□□□ -2.31
CALD1-219ENST00000480638 TNRC6BQ9UPQ9 1833 aaKnown RBP0.61□□□□□ -2.31
CALD1-219ENST00000480638 TMEM131LA2VDJ0 1609 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 SLIT1O75093 1534 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 ZMYM4Q5VZL5 1548 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 DCAF1Q9Y4B6 1507 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 A0A087WUJ7 227 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 LOC110117498A0A087WWA1 95 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 SMIM9A6NGZ8 99 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 CLDN24A6NM45 220 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 M0R036 132 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 FAAHO00519 579 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 TNNC2P02585 160 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 OR5G3P0C626 314 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 KCNE1P15382 129 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 HOXA6P31267 233 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 DEFA1P59665 94 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 RPS20P60866 119 aaKnown RBP0.6□□□□□ -2.31
CALD1-219ENST00000480638 SPCS3P61009 180 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 KISS1Q15726 138 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 BATFQ16520 125 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 HIST3H3Q16695 136 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 ACOT6Q3I5F7 207 aaPredicted RBP0.6□□□□□ -2.31
CALD1-219ENST00000480638 LCN15Q6UWW0 184 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 AAED1Q7RTV5 226 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 TRAPPC5Q8IUR0 188 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 LINC00471Q8N535 108 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 CLDN22Q8N7P3 220 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 IMP4Q96G21 291 aaKnown RBP0.6□□□□□ -2.31
CALD1-219ENST00000480638 CNBD2Q96M20 576 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 OBSCN-AS1Q96MR7 158 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 MRPL27Q9P0M9 148 aaKnown RBP0.6□□□□□ -2.31
CALD1-219ENST00000480638 DCCP43146 1447 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 UNC13BO14795 1591 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 MAST2Q6P0Q8 1798 aa0.6□□□□□ -2.31
CALD1-219ENST00000480638 TULP4Q9NRJ4 1543 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 MTUS2Q5JR59 1369 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 DYNC2H1Q8NCM8 4307 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 APC2O95996 2303 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 CNTRLQ7Z7A1 2325 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 CCDC144AA2RUR9 1427 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 NCOA1Q15788 1441 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 A0A0J9YY10 115 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 FAM236DA0A1B0GTK5 79 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 A0A1B0GX78 115 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 TMEM210A6NLX4 147 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 FABP5P3A8MUU1 101 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 TMEM114B3SHH9 223 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 RPP14O95059 124 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 IGKV1-5P01602 117 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 PRM2P04554 102 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 IFNA6P05013 189 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 FAM236CP0DP71 79 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 UCHL3P15374 230 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 HIST1H1TP22492 207 aaPredicted RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 ANP32AP39687 249 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 SULT1A1P50225 295 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 AP3S2P59780 193 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 CCL7P80098 99 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 CAV1Q03135 178 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 FADDQ13158 208 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 KCNJ8Q15842 424 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 IBA57Q5T440 356 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 HIST2H3PS2Q5TEC6 136 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 S100A7AQ86SG5 101 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 LRRC25Q8N386 305 aaPredicted RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 WFDC11Q8NEX6 87 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 DGCR14Q96DF8 476 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 FAM96AQ9H5X1 160 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 VPS29Q9UBQ0 182 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 SLC22A13Q9Y226 551 aa0.59□□□□□ -2.31
CALD1-219ENST00000480638 LSM5Q9Y4Y9 91 aaKnown RBP0.59□□□□□ -2.31
CALD1-219ENST00000480638 ZCCHC11Q5TAX3 1644 aaKnown RBP0.59□□□□□ -2.32
CALD1-219ENST00000480638 RNF17Q9BXT8 1623 aaKnown RBP0.59□□□□□ -2.32
CALD1-219ENST00000480638 HECTD4Q9Y4D8 3996 aa0.59□□□□□ -2.32
CALD1-219ENST00000480638 WIZO95785 1651 aa0.59□□□□□ -2.32
CALD1-219ENST00000480638 FAM135AQ9P2D6 1515 aa0.59□□□□□ -2.32
CALD1-219ENST00000480638 ROBO3Q96MS0 1386 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 CHD1O14646 1710 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 PHLPP1O60346 1717 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 DIP2AQ14689 1571 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 ANAPC1Q9H1A4 1944 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
CALD1-219ENST00000480638 MAP3K4Q9Y6R4 1608 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms