RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 IGLC7A0M8Q6 106 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 CGB1A6NKQ9 187 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 E7EUB6 86 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 CIDEAO60543 219 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 TRGV3P03979 118 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 CD28P10747 220 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 TAGLN2P37802 199 aaKnown RBP6.44□□□□□ -1.38
USP54-212ENST00000480210 AKR1C1Q04828 323 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 ZNF674Q2M3X9 581 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 C10orf55Q5SWW7 151 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 Q6ZRM9 215 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 OR1P1Q8NH06 330 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 PACRGQ96M98 296 aaPredicted RBP6.44□□□□□ -1.38
USP54-212ENST00000480210 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
USP54-212ENST00000480210 HINT2Q9BX68 163 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 EIF5A2Q9GZV4 153 aaKnown RBP6.44□□□□□ -1.38
USP54-212ENST00000480210 ARV1Q9H2C2 271 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 CYTL1Q9NRR1 136 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 HSPB7Q9UBY9 170 aa6.44□□□□□ -1.38
USP54-212ENST00000480210 F11RQ9Y624 299 aaKnown RBP6.44□□□□□ -1.38
USP54-212ENST00000480210 WNK1Q9H4A3 2382 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 TRBV24-1A0A075B6N3 115 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 SOX15O60248 233 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 SCAF4O95104 1147 aaKnown RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 HSPB1P04792 205 aaKnown RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 MYCNOSP40205 109 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 NKX2-1P43699 371 aaPredicted RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 TPPP2P59282 170 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 ID3Q02535 119 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 GAMTQ14353 236 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 ACOT6Q3I5F7 207 aaPredicted RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 SLC25A24Q6NUK1 477 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 Q6ZRG5 221 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 VN1R17PQ8TDU5 208 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 C4orf3Q8WVX3 66 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 TVP23CQ96ET8 276 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 NIPSNAP3BQ9BS92 247 aa6.43□□□□□ -1.38
USP54-212ENST00000480210 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 LYRM2Q9NU23 88 aaPredicted RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 FBN1P35555 2871 aaKnown RBP6.43□□□□□ -1.38
USP54-212ENST00000480210 IGLV11-55A0A075B6I3 123 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 TRBV7-1A0A0A6YYK4 115 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 K7EPK0 472 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 SYNGR2O43760 224 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 SCGB2A1O75556 95 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
USP54-212ENST00000480210 MYOD1P15172 320 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 AREGP15514 252 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 CAMLGP49069 296 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 TAS2R30P59541 319 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 RAB11AP62491 216 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 ZNF266Q14584 549 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 IZUMO4Q1ZYL8 232 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 IAH1Q2TAA2 248 aaPredicted RBP6.42□□□□□ -1.38
USP54-212ENST00000480210 C2orf83Q53S99 150 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 TCTEX1D4Q5JR98 221 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 KHDC1LQ5JSQ8 128 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 PVRIGQ6DKI7 326 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 ETFRF1Q6IPR1 90 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 C10orf99Q6UWK7 81 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 OR10W1Q8NGF6 305 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 OR4D5Q8NGN0 318 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 DTD1Q8TEA8 209 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 EEF1AKMT3Q96AZ1 226 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 MS4A10Q96PG2 267 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 RAB40CQ96S21 281 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 IMMP2LQ96T52 175 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 P2RX4Q99571 388 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 TXN2Q99757 166 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 PRR13Q9NZ81 148 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 FBXL7Q9UJT9 491 aa6.42□□□□□ -1.38
USP54-212ENST00000480210 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 E5RGE8 158 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 ZNF25P17030 456 aaPredicted RBP6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 OR10J1P30954 320 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 FCGR2BP31994 310 aaPredicted RBP6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 P2RY1P47900 373 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 RND2P52198 227 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 RHOGP84095 191 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 BSXQ3C1V8 233 aa6.41□□□□□ -1.38
USP54-212ENST00000480210 NSUN5P1Q3KNT7 163 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms