RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 Q8N2B8 174 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 OSR2Q8N2R0 312 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF565Q8N9K5 539 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 OR4M1Q8NGD0 313 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 OR5D18Q8NGL1 313 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 OR10G4Q8NGN3 311 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 FRZBQ92765 325 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM230Q96A57 120 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 SPACA5Q96QH8 159 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 GPER1Q99527 375 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 S100A13Q99584 98 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CST11Q9H112 138 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 PSG8Q9UQ74 426 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 WSB1Q9Y6I7 421 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 DSCAML1Q8TD84 2053 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 TRAV8-7A0A075B6U6 113 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 TCRBV4S1A1TA0A5B7 111 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM30CPA0ZSE6 113 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 LEUTXA8MZ59 168 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 INS-IGF2F8WCM5 200 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 LY6LH3BQJ8 138 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 H3BUX3 64 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 DENRO43583 198 aaKnown RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 ARL6IP5O75915 188 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 GABARAPO95166 117 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 ATP6V1G2O95670 118 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 CDK2P24941 298 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 BRS3P32247 399 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 PSMD7P51665 324 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 HERVK_113P61574 105 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 AESQ08117 197 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 EDDM3AQ14507 147 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 HLA-DRB5Q30154 266 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 ACSM3Q53FZ2 586 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 TPTE2P1Q5T6R2 138 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 GPR107Q5VW38 600 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 GLT8D1Q68CQ7 371 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 CEMP1Q6PRD7 247 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 CD200R1LQ6Q8B3 271 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 IZUMO2Q6UXV1 221 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 OR2W3Q7Z3T1 314 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 TRAPPC6BQ86SZ2 158 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 APRG1Q8IVJ8 170 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 LINC00311Q8N616 119 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 OR4D6Q8NGJ1 314 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 OR4P4Q8NGL7 312 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 PIFOQ8TCI5 191 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 SLC25A39Q9BZJ4 359 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 CHST6Q9GZX3 395 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 PARP12Q9H0J9 701 aaKnown RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 Q9H521 79 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 ACOT13Q9NPJ3 140 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 PEF1Q9UBV8 284 aaKnown RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 AMMECR1Q9Y4X0 333 aaPredicted RBP3.39□□□□□ -1.87
UPF3A-205ENST00000479712 LRRC42Q9Y546 428 aa3.39□□□□□ -1.87
UPF3A-205ENST00000479712 MEIKINA0A087WXM9 373 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 TRAV1-2A0A0B4J238 106 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 A0A1W2PRD5 423 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 MCRIP1C9JLW8 97 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 BUB1B-PAK6H3BSN5 160 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 M0QZK8 103 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 TOR1AO14656 332 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 GEMIN2O14893 280 aaKnown RBP3.38□□□□□ -1.87
UPF3A-205ENST00000479712 SLC22A1O15245 554 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 PDCD6O75340 191 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 OR7C1O76099 320 aaPredicted RBP3.38□□□□□ -1.87
UPF3A-205ENST00000479712 CDRT1O95170 752 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 MT-ND4P03905 459 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 SRMP19623 302 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 RAB7AP51149 207 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF137PP52743 207 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 PIGYQ3MUY2 71 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 HSD17B12Q53GQ0 312 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 LDLRAD2Q5SZI1 272 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 C6orf183Q5T699 404 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 GLIPR1L1Q6UWM5 242 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 MRPL55Q7Z7F7 128 aaKnown RBP3.38□□□□□ -1.87
UPF3A-205ENST00000479712 KRTAP11-1Q8IUC1 163 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 MGLLQ99685 303 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 BCL7BQ9BQE9 202 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 IDI2-AS1Q9NZ38 188 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 RCL1Q9Y2P8 373 aaKnown RBP3.38□□□□□ -1.87
UPF3A-205ENST00000479712 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
UPF3A-205ENST00000479712 TRDV1A0A1B0GX56 115 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 A0A1W2PRF3 423 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 A0A1W2PRM7 423 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 NCBP2LA6PVI3 153 aaKnown RBP3.37□□□□□ -1.87
UPF3A-205ENST00000479712 TMEM14DPA8MWL7 114 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 C15orf65H3BRN8 121 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 AIPO00170 330 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 CCRL2O00421 344 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 ITGB1BP1O14713 200 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 PDCD5O14737 125 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 FGF16O43320 207 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 MAS1P04201 325 aa3.37□□□□□ -1.87
UPF3A-205ENST00000479712 EIF4EP06730 217 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms