RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NEUROG1Q92886 237 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 GAFA1Q96PS6 74 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 RPP21Q9H633 154 aaKnown RBP11.78□□□□□ -0.52
COL20A1-206ENST00000479501 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-206ENST00000479501 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 GPR82Q96P67 336 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 PIMREGQ9BSJ6 248 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 GNB1LQ9BYB4 327 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 JKAMPQ9P055 326 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 STAG3L3P0CL85 134 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 CD33P20138 364 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 Q8NFD4 153 aa11.78□□□□□ -0.52
COL20A1-206ENST00000479501 AREGP15514 252 aa11.77□□□□□ -0.52
COL20A1-206ENST00000479501 RELQ04864 619 aaPredicted RBP11.77□□□□□ -0.52
COL20A1-206ENST00000479501 SAMD13Q5VXD3 122 aa11.77□□□□□ -0.52
COL20A1-206ENST00000479501 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 SH2D7A6NKC9 451 aaPredicted RBP11.77□□□□□ -0.53
COL20A1-206ENST00000479501 CDKN1AP38936 164 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 FOXL1Q12952 345 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 IL15RAQ13261 267 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 TNFRSF14Q92956 283 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 DMRTA2Q96SC8 542 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
COL20A1-206ENST00000479501 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 PSG9Q00887 426 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 HIST1H1AQ02539 215 aaPredicted RBP11.77□□□□□ -0.53
COL20A1-206ENST00000479501 ZNF672Q499Z4 452 aaPredicted RBP11.77□□□□□ -0.53
COL20A1-206ENST00000479501 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 C21orf62Q9NYP8 219 aa11.77□□□□□ -0.53
COL20A1-206ENST00000479501 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
COL20A1-206ENST00000479501 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
COL20A1-206ENST00000479501 CX3CL1P78423 397 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 C16orf92Q96LL3 132 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 A0A1W2PRE2 83 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 TCRBV4S1A1TA0A5B7 111 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 NBR2O15453 112 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 SPSB3Q6PJ21 355 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 PIP4P1Q86T03 277 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 DNAH12Q6ZR08 3092 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 MUC21A0A0G2JKD1 596 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 MUC21A0A140T8X8 626 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
COL20A1-206ENST00000479501 CD24P25063 80 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 RAB9AP51151 201 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 PAX9P55771 341 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 MUC21Q5SSG8 566 aa11.76□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV1-8P0DP01 117 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 OR10J3Q5JRS4 329 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 Q6ZSR3 168 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 OR2K2Q8NGT1 345 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 TYMSP04818 313 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 LY6EQ16553 131 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 PYYP10082 97 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 MGST2Q99735 147 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
COL20A1-206ENST00000479501 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 TIMM23O14925 209 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 FAM53AQ6NSI3 398 aaPredicted RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 SLC25A48Q6ZT89 311 aaKnown RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 A0A1W2PS18 150 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 A8MWP6 167 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 MYOD1P15172 320 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 EMP1P54849 157 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 SEPSECSQ9HD40 501 aaKnown RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 SPG11Q96JI7 2443 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGLV1-44P01699 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 NPPCP23582 126 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 AMMECR1LQ6DCA0 310 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV2-26A0A0B4J1V2 119 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 IGHV3-23P01764 117 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 ATP5G2Q06055 141 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 ORMDL3Q8N138 153 aa11.74□□□□□ -0.53
COL20A1-206ENST00000479501 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
COL20A1-206ENST00000479501 EREGO14944 169 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 THBDP07204 575 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 COX6B1P14854 86 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 EEF1AKMT3Q96AZ1 226 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
COL20A1-206ENST00000479501 ITGB1BP1O14713 200 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms