RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF257Q9Y2Q1 563 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 NUBP2Q9Y5Y2 271 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 R4GMQ9 66 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 FBN3Q75N90 2809 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SVEP1Q4LDE5 3571 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAV1-2A0A0B4J238 106 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 KIR2DS1A0A191URI9 304 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM269A0A1B0GVZ9 245 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 C5orf63A6NC05 138 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF850A8MQ14 1090 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 HMSDA8MTL9 139 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LEUTXA8MZ59 168 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF879B4DU55 563 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 INMT-MINDY4F8WBC2 141 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 H0YJW9 148 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 PLA2G10O15496 165 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LYRM1O43325 122 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SULT1B1O43704 296 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ENTPD6O75354 484 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 NRASP01111 189 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGKV2D-28P01615 120 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 RBP4P02753 201 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 CD74P04233 296 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 IL5P05113 134 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ISG15P05161 165 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 PRTN3P24158 256 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 OPRK1P41145 380 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TGM4P49221 684 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ETV1P50549 477 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LINC00315P59091 139 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 AP3S2P59780 193 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 RAB14P61106 215 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ACTG1P63261 375 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 CTAG1AP78358 180 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SSBP1Q04837 148 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SSX1Q16384 188 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 CEACAM21Q3KPI0 293 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCDC58Q4VC31 144 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF684Q5T5D7 378 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 C6orf183Q5T699 404 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM244Q5VVB8 128 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRIQKQ629K1 86 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TEX261Q6UWH6 196 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM131AQ6UXB0 335 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 Q8IYB0 196 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 H1FOOQ8IZA3 346 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SYS1Q8N2H4 156 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 YIPF7Q8N8F6 280 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZDHHC22Q8N966 263 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 UBAC2Q8NBM4 344 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 LRRC20Q8TCA0 184 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 PP6455Q8WZ26 134 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR5P3Q8WZ94 311 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 AQP3Q92482 292 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 CPNE2Q96FN4 548 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 GAFA1Q96PS6 74 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPIN2AQ99865 258 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPIN2BQ9BPZ2 258 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51E2Q9H255 320 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 MIXL1Q9H2W2 232 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51I2Q9H344 312 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 PLEKHA1Q9HB21 404 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 RHOFQ9HBH0 211 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 HES4Q9HCC6 221 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 GPR84Q9NQS5 396 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 TXNL4BQ9NX01 149 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRM2Q9UI43 246 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 RPUSD1Q9UJJ7 312 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 SCP2D1Q9UJQ7 156 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR52A1Q9UKL2 312 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 U3KQ87 197 aa2.35□□□□□ -2.03
CDC42BPA-212ENST00000478573 DNHD1Q96M86 4753 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TENM1Q9UKZ4 2725 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 WNK1Q9H4A3 2382 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 MEIKINA0A087WXM9 373 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SMIM26A0A096LP01 95 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGHV3-72A0A0B4J1Y9 119 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 LOC100506127A0A0U1RQW1 187 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 A0A1B0GTI1 187 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 A0A1W2PPV4 95 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 A0A1W2PQL4 384 aaPredicted RBP2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 PQLC2LA1A4F0 135 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 LRCOL1A6NCL2 159 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM212A6NML5 194 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2AT4A6NND4 320 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SNRPGP15A8MWD9 76 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 J3QRE1 110 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 M0R129 80 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 CDIPTO14735 213 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 RGS5O15539 181 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 NDUFB3O43676 98 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 IGHV1-69P01742 117 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 GYPAP02724 150 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 FBP1P09467 338 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms