RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 OVOL3O00110 214 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 NKX2-8O15522 239 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 CKS1BP61024 79 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 WFDC2Q14508 124 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 PSG3Q16557 428 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 C3AR1Q16581 482 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 MDP1Q86V88 176 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 FAM90A1Q86YD7 464 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 OR5A1Q8NGJ0 315 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 ITLN1Q8WWA0 313 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 S1PR3Q99500 378 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 TTTY13Q9BZ97 58 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 IFI27L2Q9H2X8 130 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 RPP21Q9H633 154 aaKnown RBP7.95□□□□□ -1.14
COL13A1-207ENST00000478219 AHCTF1Q8WYP5 2266 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 A8MWL6 223 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 H3BTX0 84 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 SCGB2A2Q13296 93 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 TMEM177Q53S58 311 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 FAM162BQ5T6X4 162 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 SAMD5Q5TGI4 173 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 PATE2Q6UY27 113 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 STXBP6Q8NFX7 210 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 LINC00470Q9BZP3 86 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 PRSS22Q9GZN4 317 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 ZNF257Q9Y2Q1 563 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 CACNA1EQ15878 2313 aa7.95□□□□□ -1.14
COL13A1-207ENST00000478219 IGKV3D-15A0A087WSY6 115 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 A1L4Q6 167 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 TMEM189A5PLL7 270 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 C2CD4DB7Z1M9 353 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 FABP2P12104 132 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 INSL3P51460 131 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 FXYD2P54710 66 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 ATP5G2Q06055 141 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 CD300EQ496F6 205 aaPredicted RBP7.94□□□□□ -1.14
COL13A1-207ENST00000478219 MTURNQ8N3F0 131 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 BLNKQ8WV28 456 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 DDB2Q92466 427 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 ADTRPQ96IZ2 230 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 ASCL2Q99929 193 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 PAXXQ9BUH6 204 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 MLST8Q9BVC4 326 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 CHEK1O14757 476 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 MPV17P39210 176 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 Q0VFX4 171 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 PPP1R32Q7Z5V6 425 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 CD177Q8N6Q3 437 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 SMRP1Q8NCR6 262 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 OR2Z1Q8NG97 314 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 ENY2Q9NPA8 101 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
COL13A1-207ENST00000478219 FOXA2Q9Y261 457 aaPredicted RBP7.94□□□□□ -1.14
COL13A1-207ENST00000478219 SRRM4A7MD48 611 aaKnown RBP7.93□□□□□ -1.14
COL13A1-207ENST00000478219 MYCNOSP40205 109 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 TIMM23BQ5SRD1 257 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 ZNF576Q9H609 170 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
COL13A1-207ENST00000478219 C19orf71A6NCJ1 209 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 SPINT2O43291 252 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 FSTL3O95633 263 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 NMUP48645 174 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 LOXL3P58215 753 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 CACNG7P62955 275 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 SPAG8Q99932 426 aaPredicted RBP7.93□□□□□ -1.14
COL13A1-207ENST00000478219 C19orf24Q9BVV8 132 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 OBP2BQ9NPH6 170 aa7.93□□□□□ -1.14
COL13A1-207ENST00000478219 ICE1Q9Y2F5 2266 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 TRAV8-1A0A0A6YYK1 113 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 P01737 135 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 SLC25A5P05141 298 aaKnown RBP7.92□□□□□ -1.14
COL13A1-207ENST00000478219 FTH1P19P0C7X4 201 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 IFI27P40305 119 aaPredicted RBP7.92□□□□□ -1.14
COL13A1-207ENST00000478219 SPINK14Q6IE38 97 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 RBPMS2Q6ZRY4 209 aaKnown RBP7.92□□□□□ -1.14
COL13A1-207ENST00000478219 FZR1Q9UM11 496 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 EPDR1Q9UM22 224 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 LOC389332A0A1B0GUA5 103 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 PGPA6NDG6 321 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 C16orf97H3BN30 126 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 LTAP01374 205 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 RUSC1-AS1Q66K80 236 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 CIARTQ8N365 385 aaPredicted RBP7.92□□□□□ -1.14
COL13A1-207ENST00000478219 ARPC1AQ92747 370 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 GPR82Q96P67 336 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 HES7Q9BYE0 225 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 MRPL36Q9P0J6 103 aaKnown RBP7.92□□□□□ -1.14
COL13A1-207ENST00000478219 ZNRD1Q9P1U0 126 aa7.92□□□□□ -1.14
COL13A1-207ENST00000478219 E7EUB6 86 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 IGKV1-16P04430 117 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 GCSHP23434 173 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 PLGLB1Q02325 96 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 ETDBQ3ZM63 59 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 DHRS13Q6UX07 377 aa7.91□□□□□ -1.14
COL13A1-207ENST00000478219 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms