RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 TOMM40O96008 361 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 TBPP20226 339 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 ID1P41134 155 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 SP6Q3SY56 376 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 RNASE10Q5GAN6 216 aaKnown RBP6.85□□□□□ -1.31
CCM2-210ENST00000478169 SPATA31B1PQ5VZV4 182 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 NOXA1Q86UR1 476 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 CLVS1Q8IUQ0 354 aaPredicted RBP6.85□□□□□ -1.31
CCM2-210ENST00000478169 SLC24A4Q8NFF2 622 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 S100ZQ8WXG8 99 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 NPIPB3Q92617 1050 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 RBM38Q9H0Z9 239 aaKnown RBP6.85□□□□□ -1.31
CCM2-210ENST00000478169 SAV1Q9H4B6 383 aaPredicted RBP6.85□□□□□ -1.31
CCM2-210ENST00000478169 COMMD3Q9UBI1 195 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
CCM2-210ENST00000478169 CDS2O95674 445 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 HBE1P02100 147 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 HTN3P15516 51 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 PSMB3P49720 205 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 FXYD7P58549 80 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 LSM3P62310 102 aaKnown RBP6.84□□□□□ -1.31
CCM2-210ENST00000478169 GDF5OSQ5U4N7 250 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 TERB2Q8NHR7 220 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 YIPF6Q96EC8 236 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 ABHD1Q96SE0 405 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 TMEM222Q9H0R3 208 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 CACFD1Q9UGQ2 172 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 GOLT1BQ9Y3E0 138 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
CCM2-210ENST00000478169 LRP1BQ9NZR2 4599 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 CEBPZOSA8MTT3 80 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 NXPH3O95157 252 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 IGKV3-20P01619 116 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 CD3DP04234 171 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 PSG1P11464 419 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 ELK1P19419 428 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 PAX9P55771 341 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 PSG9Q00887 426 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 ZNF79Q15937 498 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 OR8G2PQ6IF36 304 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 TMEM88Q6PEY1 159 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 OR51G1Q8NGK1 321 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 OR13C8Q8NGS7 320 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 TMEM170AQ8WVE7 144 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 RBPMSQ93062 196 aaKnown RBP6.83□□□□□ -1.32
CCM2-210ENST00000478169 RNF125Q96EQ8 232 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 LINC00052Q96N35 136 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 C7orf50Q9BRJ6 194 aaKnown RBP6.83□□□□□ -1.32
CCM2-210ENST00000478169 WDR12Q9GZL7 423 aaKnown RBP6.83□□□□□ -1.32
CCM2-210ENST00000478169 CACNG5Q9UF02 275 aa6.83□□□□□ -1.32
CCM2-210ENST00000478169 YTHDF2Q9Y5A9 579 aaKnown RBP6.83□□□□□ -1.32
CCM2-210ENST00000478169 TEX13DA0A0J9YY54 714 aaPredicted RBP6.82□□□□□ -1.32
CCM2-210ENST00000478169 SOCS3O14543 225 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 HPGDSO60760 199 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 DEFB1P60022 68 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 DAD1P61803 113 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 TNP2Q05952 138 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 RRN3P1Q2M238 152 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 NMSQ5H8A3 153 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 SAMD13Q5VXD3 122 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 EBLN2Q6P2I7 272 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 GSG1LQ6UXU4 331 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 OR4B1Q8NGF8 309 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 COQ8AQ8NI60 647 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 MARCH1Q8TCQ1 289 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 GLYATL2Q8WU03 294 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 ACY3Q96HD9 319 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 MTFP1Q9UDX5 166 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 U3KQ87 197 aa6.82□□□□□ -1.32
CCM2-210ENST00000478169 A0A0J9YX75 114 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 ISLRO14498 428 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 RORCP51449 518 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 TAS2R19P59542 299 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 SUPT4H1P63272 117 aaKnown RBP6.81□□□□□ -1.32
CCM2-210ENST00000478169 KLF9Q13886 244 aaPredicted RBP6.81□□□□□ -1.32
CCM2-210ENST00000478169 SCGB2B2Q4G0G5 96 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 FAM78BQ5VT40 261 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 MZT2AQ6P582 158 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 SELENOHQ8IZQ5 122 aaKnown RBP6.81□□□□□ -1.32
CCM2-210ENST00000478169 C6orf223Q8N319 242 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 TMEM229BQ8NBD8 167 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 OR52I2Q8NH67 350 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 LHFPL5Q8TAF8 219 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 GPR146Q96CH1 333 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 MAGT1Q9H0U3 335 aa6.81□□□□□ -1.32
CCM2-210ENST00000478169 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms